ATTED-II : GeneID search result

[←][→] ath At1g22640 Gene

functional annotation

Function

myb domain protein 3

GO BP

GO:0009800 [list] [network] cinnamic acid biosynthetic process	(5 genes)	TAS
GO:0009611 [list] [network] response to wounding	(816 genes)	IEP
GO:0009892 [list] [network] negative regulation of metabolic process	(1067 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001322404.1 NP_001322405.1 NP_564176.2

BLAST

NP_001322404.1 NP_001322405.1 NP_564176.2

Orthologous

[Ortholog page] LOC543159 (tae) THM27 (sly) MYB54 (gma) MYB48 (gma) MYB56 (gma) MYBZ2 (gma) MYB7 (ath) MYB5 (ath) MYB6 (ath) MYB32 (ath) MYB4 (ath) HOS10 (ath) LOC4323897 (osa) LOC4324770 (osa) LOC4346246 (osa) LOC4349938 (osa) LOC7453642 (ppo) LOC7459789 (ppo) LOC7462479 (ppo) LOC7463575 (ppo) LOC7469886 (ppo) LOC7475793 (ppo) LOC7482876 (ppo) LOC7483247 (ppo) LOC7487152 (ppo) LOC7489662 (ppo) LOC7493553 (ppo) LOC7494250 (ppo) LOC9266213 (osa) LOC9271088 (osa) LOC9272091 (osa) LOC11427010 (mtr) LOC11436928 (mtr) LOC11442816 (mtr) LOC11443109 (mtr) LOC18097760 (ppo) LOC18099174 (ppo) LOC18104119 (ppo) LOC18104422 (ppo) LOC18106646 (ppo) LOC18108239 (ppo) LOC25489890 (mtr) LOC25490340 (mtr) MYB047 (gma) LOC100306391 (gma) W2 (gma) LOC100793444 (gma) LOC100797847 (gma) LOC100808083 (gma) MYB159 (gma) MYB3A (gma) LOC100859947 (tae) LOC100873098 (tae) LOC100873105 (tae) LOC101243923 (sly) LOC101255895 (sly) LOC101263944 (sly) LOC101264519 (sly) LOC103828091 (bra) LOC103829318 (bra) LOC103832978 (bra) LOC103835174 (bra) LOC103840842 (bra) LOC103849769 (bra) LOC103858520 (bra) LOC103860474 (bra) LOC103862384 (bra) LOC103870122 (bra) LOC123057014 (tae) LOC123061794 (tae) LOC123062765 (tae) LOC123065558 (tae) LOC123066010 (tae) LOC123074668 (tae) LOC123086670 (tae) LOC123091291 (tae) LOC123099635 (tae) LOC123104608 (tae) LOC123106768 (tae) LOC123111054 (tae) LOC123122385 (tae) LOC123124534 (tae) LOC123134403 (tae) LOC123152519 (tae) LOC123161720 (tae) LOC123396086 (hvu) LOC123400161 (hvu) LOC123412860 (hvu) LOC123440133 (hvu) LOC123440451 (hvu) LOC123446368 (hvu) LOC123447943 (hvu)

Subcellular
localization
wolf

cyto 6, extr 1, chlo 1, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1	(predict for NP_001322404.1)
nucl 6, chlo 2, cyto 1, pero 1, cyto_pero 1	(predict for NP_001322405.1)
nucl 6, cyto 2, chlo 1, mito 1, chlo_mito 1	(predict for NP_564176.2)

Subcellular
localization
TargetP

other 3	(predict for NP_001322404.1)
other 8	(predict for NP_001322405.1)
other 8	(predict for NP_564176.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with MYB3 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.9	AT1G23390	Kelch repeat-containing F-box family protein	[detail]	838947
5.8	SR1	serine/threonine protein kinase 1	[detail]	831765
5.7	AT5G03230	senescence regulator (Protein of unknown function, DUF584)	[detail]	831900
5.6	AT1G26920	zinc finger CCHC domain protein	[detail]	839582
5.4	MYB6	myb domain protein 6	[detail]	826530

Coexpressed
gene list

[Coexpressed gene list for MYB3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264210_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264210_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264210_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838870
Refseq ID (protein)	NP_001322404.1
	NP_001322405.1
	NP_564176.2

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