[←][→] ath   At1g24260 Gene
functional annotation
Function   K-box region and MADS-box transcription factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048833 [list] [network] specification of floral organ number  (5 genes)  IMP  
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:0080001 [list] [network] mucilage extrusion from seed coat  (13 genes)  IMP  
GO:0001708 [list] [network] cell fate specification  (34 genes)  IMP  
GO:0010214 [list] [network] seed coat development  (54 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (60 genes)  IMP  
GO:0009908 [list] [network] flower development  (492 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA IDA ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001185081.1  NP_564214.2  NP_850953.1 
BLAST NP_001185081.1  NP_564214.2  NP_850953.1 
Orthologous [Ortholog page] LOC542969 (tae)  RIN (sly)  TM29 (sly)  MADS1 (sly)  LOC543885 (sly)  MADS28 (gma)  SEP1 (gma)  LOC780637 (tae)  SEP2 (ath)  SEP1 (ath)  LOC4346134 (osa)  LOC4347517 (osa)  LOC7460556 (ppo)  LOC7463059 (ppo)  LOC7498222 (ppo)  LOC11425103 (mtr)  LOC11427564 (mtr)  LOC11442092 (mtr)  LOC11446395 (mtr)  LOC18097110 (ppo)  LOC18107344 (ppo)  LOC25493906 (mtr)  LOC25495434 (mtr)  LOC100137001 (tae)  LOC100778931 (gma)  LOC100785322 (gma)  LOC100786066 (gma)  LOC100788427 (gma)  LOC100794429 (gma)  LOC100797819 (gma)  LOC100804810 (gma)  LOC100805078 (gma)  LOC100811049 (gma)  LOC100813520 (gma)  CMB1 (sly)  LOC101263981 (sly)  LOC103829078 (bra)  LOC103835412 (bra)  LOC103839053 (bra)  LOC103842962 (bra)  LOC103846385 (bra)  LOC103856162 (bra)  LOC103870919 (bra)  LOC123104312 (tae)  LOC123151806 (tae)  LOC123156477 (tae)  LOC123399777 (hvu)  LOC123411982 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001185081.1)
nucl 10  (predict for NP_564214.2)
nucl 10  (predict for NP_850953.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001185081.1)
other 8,  mito 5  (predict for NP_564214.2)
other 8,  mito 5  (predict for NP_850953.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SEP3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.9 AG K-box region and MADS-box transcription factor family protein [detail] 827631
8.7 AP3 K-box region and MADS-box transcription factor family protein [detail] 824601
7.7 SWEET10 Nodulin MtN3 family protein [detail] 835151
7.3 SEP1 K-box region and MADS-box transcription factor family protein [detail] 831436
5.6 AT4G00870 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 827990
5.5 AT3G04960 trichohyalin, putative (DUF3444) [detail] 819656
Coexpressed
gene list		 [Coexpressed gene list for SEP3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264872_at
264872_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264872_at
264872_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264872_at
264872_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839040      
Refseq ID (protein) NP_001185081.1 
NP_564214.2 
NP_850953.1 


The preparation time of this page was 0.1 [sec].