[←][→] ath   At1g25230 Gene
functional annotation
Function   Calcineurin-like metallo-phosphoesterase superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009642 [list] [network] response to light intensity  (373 genes)  IEA  
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO:0040007 [list] [network] growth  (1270 genes)  IEA  
GO:0006082 [list] [network] organic acid metabolic process  (1847 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG ath00740 [list] [network] Riboflavin metabolism (20 genes)
Protein NP_001321434.1  NP_001321435.1  NP_173894.2 
BLAST NP_001321434.1  NP_001321435.1  NP_173894.2 
Orthologous [Ortholog page] PAP (gma)  PAP7 (ath)  PAP8 (ath)  PAP17 (ath)  PAP3 (ath)  LOC4332195 (osa)  LOC4347989 (osa)  LOC7462649 (ppo)  LOC7471442 (ppo)  LOC7485178 (ppo)  LOC9270602 (osa)  LOC11426514 (mtr)  LOC18101530 (ppo)  LOC18105599 (ppo)  LOC25496646 (mtr)  LOC100682408 (tae)  LOC100787655 (gma)  LOC100789603 (gma)  LOC100793835 (gma)  LOC100813453 (gma)  LOC100816294 (gma)  LOC100817359 (gma)  LOC100818610 (gma)  LOC101244004 (sly)  LOC101249252 (sly)  LOC101260420 (sly)  LOC103827543 (bra)  LOC103827544 (bra)  LOC103829137 (bra)  LOC103836056 (bra)  LOC103839022 (bra)  LOC103854031 (bra)  PAP17-1 (bra)  LOC112324310 (ppo)  LOC120577290 (mtr)  LOC120577317 (mtr)  LOC120577699 (mtr)  LOC120577755 (mtr)  LOC123048987 (tae)  LOC123092830 (tae)  LOC123098121 (tae)  LOC123429669 (hvu)  LOC123449201 (hvu) 
Subcellular
localization
wolf
nucl 5,  chlo 1,  cyto 1,  mito 1,  extr 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001321434.1)
chlo 3,  nucl 2,  vacu 1,  golg 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_001321435.1)
extr 4,  vacu 2,  cyto 1,  E.R._vacu 1  (predict for NP_173894.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001321434.1)
scret 5  (predict for NP_001321435.1)
scret 9  (predict for NP_173894.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT1G25230 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 AT4G01330 Protein kinase superfamily protein [detail] 828117
5.4 BXL1 beta-xylosidase 1 [detail] 834996
5.3 AT3G12710 DNA glycosylase superfamily protein [detail] 820453
4.9 AT1G28100 uncharacterized protein [detail] 839703
3.6 AT5G16410 HXXXD-type acyl-transferase family protein [detail] 831502
Coexpressed
gene list		 [Coexpressed gene list for AT1G25230]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245637_at
245637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245637_at
245637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245637_at
245637_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839105      
Refseq ID (protein) NP_001321434.1 
NP_001321435.1 
NP_173894.2 


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