[←][→] ath   AT1G27630 Gene
functional annotation
Function   cyclin T 1;3  
GO BP
GO:0032786 [list] [network] positive regulation of DNA-templated transcription, elongation  (24 genes)  IBA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IBA  
GO CC
GO:0008024 [list] [network] cyclin/CDK positive transcription elongation factor complex  (4 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0061575 [list] [network] cyclin-dependent protein serine/threonine kinase activator activity  (7 genes)  IBA  
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (46 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001321314.1  NP_001321315.1  NP_001321316.1  NP_001321317.1  NP_001321318.1  NP_174084.1 
BLAST NP_001321314.1  NP_001321315.1  NP_001321316.1  NP_001321317.1  NP_001321318.1  NP_174084.1 
Orthologous [Ortholog page] CYCT1;2 (ath)  CYCT1;4 (ath)  AT5G45190 (ath)  LOC4328207 (osa)  LOC4349827 (osa)  LOC4352229 (osa)  LOC7479725 (ppo)  LOC11416403 (mtr)  LOC25499053 (mtr)  LOC100217076 (zma)  LOC100256429 (vvi)  LOC100265067 (vvi)  LOC100266147 (vvi)  LOC100383879 (zma)  LOC100384646 (zma)  LOC100778842 (gma)  LOC100780279 (gma)  LOC100791516 (gma)  LOC100802312 (gma)  LOC100803349 (gma)  LOC100808446 (gma)  LOC101250904 (sly)  LOC101260979 (sly)  LOC103626584 (zma)  LOC103630860 (zma)  LOC103827811 (bra)  LOC103829052 (bra)  LOC103834124 (bra)  LOC103835384 (bra)  LOC103853610 (bra)  LOC103857462 (bra)  LOC103857507 (bra) 
Subcellular
localization
wolf
mito 5,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001321314.1)
mito 5,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001321315.1)
nucl 7,  cyto 2  (predict for NP_001321316.1)
mito 5,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001321317.1)
mito 5,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001321318.1)
nucl 8,  cyto 2  (predict for NP_174084.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for NP_001321314.1)
mito 6,  other 3  (predict for NP_001321315.1)
other 6,  mito 5  (predict for NP_001321316.1)
mito 6,  other 3  (predict for NP_001321317.1)
mito 6,  other 3  (predict for NP_001321318.1)
other 6,  mito 5  (predict for NP_174084.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
ath04075 Plant hormone signal transduction 2
Genes directly connected with CYCT1;3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 TAG1 membrane bound O-acyl transferase (MBOAT) family protein [detail] 816464
7.2 BBX8 B-box type zinc finger protein with CCT domain-containing protein [detail] 834878
7.1 PRR5 two-component response regulator-like protein [detail] 832518
6.8 AT5G23575 Transmembrane CLPTM1 family protein [detail] 832423
5.7 AT1G03960 Calcium-binding EF hand family protein [detail] 839361
5.1 HDA2 histone deacetylase 2 [detail] 832673
4.8 BSK8 kinase with tetratricopeptide repeat domain-containing protein [detail] 834127
Coexpressed
gene list		 [Coexpressed gene list for CYCT1;3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262296_at
262296_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262296_at
262296_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262296_at
262296_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839655      
Refseq ID (protein) NP_001321314.1 
NP_001321315.1 
NP_001321316.1 
NP_001321317.1 
NP_001321318.1 
NP_174084.1 


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