[←][→] ath   AT1G27650 Gene
functional annotation
Function   U2 snRNP auxiliary factor small subunit  
GO BP
GO:0048573 [list] [network] photoperiodism, flowering  (67 genes)  IMP  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001077609.1  NP_174086.1 
BLAST NP_001077609.1  NP_174086.1 
Orthologous [Ortholog page] U2AF35B (ath)  LOC4339621 (osa)  LOC7474543 (ppo)  LOC7494732 (ppo)  LOC9268567 (osa)  LOC25487504 (mtr)  LOC100191858 (zma)  LOC100247727 (vvi)  LOC100266834 (vvi)  LOC100272749 (zma)  LOC100282114 (zma)  LOC100284238 (zma)  LOC100792507 (gma)  LOC100794975 (gma)  LOC100799606 (gma)  LOC101245917 (sly)  LOC101263952 (sly)  LOC103652188 (zma)  LOC103835383 (bra)  LOC103839277 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001077609.1)
nucl 10  (predict for NP_174086.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001077609.1)
other 7,  chlo 3  (predict for NP_174086.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with ATU2AF35A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT4G31430 flocculation protein [detail] 829270
8.9 U2AF35B Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 834293
8.9 TIM17-2 translocase inner membrane subunit 17-2 [detail] 818317
8.8 ASIL2 sequence-specific DNA binding transcription factor [detail] 820635
8.2 AT4G08460 hypothetical protein (DUF1644) [detail] 826405
8.0 RSZ21 RS-containing zinc finger protein 21 [detail] 838997
8.0 FHA2 SMAD/FHA domain-containing protein [detail] 819910
7.4 AT1G17520 Homeodomain-like/winged-helix DNA-binding family protein [detail] 838326
7.3 TIM23-1 translocase of inner mitochondrial membrane 23 [detail] 838327
7.3 MBD6 methyl-CPG-binding domain 6 [detail] 836057
6.8 AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [detail] 836219
6.8 AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836117
6.4 SWI3B switch subunit 3 [detail] 817927
5.9 AT1G78150 N-lysine methyltransferase [detail] 844151
5.6 AT1G27090 glycine-rich protein [detail] 839598
5.6 AT3G17460 PHD finger family protein [detail] 821010
5.4 AT4G14720 TIFY domain/Divergent CCT motif family protein [detail] 827125
5.1 AT1G01990 hypothetical protein [detail] 837456
Coexpressed
gene list		 [Coexpressed gene list for ATU2AF35A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262295_at
262295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262295_at
262295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262295_at
262295_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839657      
Refseq ID (protein) NP_001077609.1 
NP_174086.1 


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