[][] ath   AT1G27700 Gene
functional annotation
Function   Syntaxin/t-SNARE family protein
GO BP
GO:0006906 [list] [network] vesicle fusion  (30 genes)  IBA  
GO:0048278 [list] [network] vesicle docking  (37 genes)  IBA  
GO:0048193 [list] [network] Golgi vesicle transport  (151 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IBA  
GO CC
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0012505 [list] [network] endomembrane system  (2531 genes)  IBA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  IBA  
GO:0000149 [list] [network] SNARE binding  (54 genes)  IBA  
KEGG
Protein NP_564292.1 
BLAST NP_564292.1 
Orthologous [Ortholog page] LOC4332002 (osa)LOC4348362 (osa)LOC11417872 (mtr)LOC25489939 (mtr)LOC100262567 (vvi)LOC100794853 (gma)LOC100795867 (gma)LOC100800191 (gma)LOC100815067 (gma)LOC101257750 (sly)LOC101264319 (sly)LOC103632029 (zma)LOC103829050 (bra)LOC103835378 (bra)
Subcellular
localization
wolf
golg 3,  chlo 2,  nucl 1,  mito 1,  E.R._plas 1,  plas 1,  E.R. 1  (predict for NP_564292.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564292.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with AT1G27700 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.6 AT1G15970 DNA glycosylase superfamily protein [detail] 838167
5.5 AT1G69030 BSD domain-containing protein [detail] 843235
5.4 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843123
5.2 AT3G07270 GTP cyclohydrolase I [detail] 819915
4.6 AT4G17650 Polyketide cyclase / dehydrase and lipid transport protein [detail] 827485
4.4 AT1G80850 DNA glycosylase superfamily protein [detail] 844424
Coexpressed
gene list
[Coexpressed gene list for AT1G27700]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261649_at
261649_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261649_at
261649_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
261649_at
261649_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839663    
Refseq ID (protein) NP_564292.1 


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