ATTED-II : GeneID search result

[←][→] ath At1g28130 Gene

functional annotation

Function

Auxin-responsive GH3 family protein

GO BP

GO:0010252 [list] [network] auxin homeostasis	(35 genes)	TAS
GO:0009733 [list] [network] response to auxin	(384 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus	(10305 genes)	HDA ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	HDA

GO MF

GO:0010279 [list] [network] indole-3-acetic acid amido synthetase activity

(6 genes)

IDA

KEGG

ath04075 [list] [network] Plant hormone signal transduction (291 genes)

Protein

NP_174134.1 NP_849718.1

BLAST

NP_174134.1 NP_849718.1

Orthologous

[Ortholog page] LOC4350632 (osa) LOC7491441 (ppo) LOC7496523 (ppo) LOC103829030 (bra) LOC103838986 (bra) LOC103847622 (bra) LOC117127445 (bra)

Subcellular
localization
wolf

nucl 6, cyto 4	(predict for NP_174134.1)
chlo 6, chlo_mito 4, nucl 1, mito 1	(predict for NP_849718.1)

Subcellular
localization
TargetP

other 8	(predict for NP_174134.1)
other 5, mito 3	(predict for NP_849718.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	8

Genes directly connected with GH3.17 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.0	DFL1	Auxin-responsive GH3 family protein	[detail]	835539
5.5	WES1	Auxin-responsive GH3 family protein	[detail]	828834
4.0	AT3G14060	uncharacterized protein	[detail]	820620

Coexpressed
gene list

[Coexpressed gene list for GH3.17]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259596_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259596_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259596_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839706
Refseq ID (protein)	NP_174134.1
Refseq ID (protein)	NP_849718.1

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