[←][→] ath   AT1G29850 Gene
functional annotation
Function   double-stranded DNA-binding family protein  
GO BP
GO:0012501 [list] [network] programmed cell death  (106 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IDA  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IMP  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319109.1  NP_564336.1  NP_849728.1 
BLAST NP_001319109.1  NP_564336.1  NP_849728.1 
Orthologous [Ortholog page] LOC9269971 (osa)  LOC25493385 (mtr)  LOC100245316 (vvi)  LOC100280625 (zma)  LOC100305716 (gma)  LOC100786356 (gma)  LOC101265990 (sly)  LOC103635288 (zma)  LOC103828923 (bra)  LOC103835253 (bra)  LOC103840456 (bra)  LOC112939070 (osa) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  cyto_E.R. 2,  cysk_nucl 1  (predict for NP_001319109.1)
nucl 4,  mito 3,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_564336.1)
nucl 5,  cyto 2,  mito 2  (predict for NP_849728.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319109.1)
other 7  (predict for NP_564336.1)
other 7  (predict for NP_849728.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G29850 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 I-2 phosphoprotein phosphatase inhibitor [detail] 835296
8.3 SYP61 syntaxin of plants 61 [detail] 839749
7.8 AT2G16860 GCIP-interacting family protein [detail] 816187
7.5 AT5G03660 transcriptional activator (DUF662) [detail] 831768
7.2 RUB1 related to ubiquitin 1 [detail] 840023
Coexpressed
gene list		 [Coexpressed gene list for AT1G29850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256001_at
256001_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256001_at
256001_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256001_at
256001_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839863      
Refseq ID (protein) NP_001319109.1 
NP_564336.1 
NP_849728.1 


The preparation time of this page was 0.2 [sec].