[←][→] ath   AT1G30010 Gene
functional annotation
Function   Intron maturase, type II family protein  
GO BP
GO:0000374 [list] [network] Group III intron splicing  (1 genes)  IMP  
GO:0010896 [list] [network] regulation of triglyceride catabolic process  (2 genes)  IMP  
GO:0006314 [list] [network] intron homing  (3 genes)  IEA  
GO:0090615 [list] [network] mitochondrial mRNA processing  (7 genes)  IMP  
GO:2001006 [list] [network] regulation of cellulose biosynthetic process  (12 genes)  IMP  
GO:0006521 [list] [network] regulation of cellular amino acid metabolic process  (21 genes)  IMP  
GO:0000373 [list] [network] Group II intron splicing  (24 genes)  IMP  
GO:0032885 [list] [network] regulation of polysaccharide biosynthetic process  (24 genes)  IMP  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO:0090351 [list] [network] seedling development  (115 genes)  IMP  
GO:0007005 [list] [network] mitochondrion organization  (158 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IEA  
KEGG
Protein NP_174294.1 
BLAST NP_174294.1 
Orthologous [Ortholog page] LOC4352050 (osa)  LOC100252074 (vvi)  LOC100810812 (gma)  LOC101252126 (sly)  LOC103631821 (zma)  LOC103840440 (bra)  LOC112419501 (mtr) 
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 3  (predict for NP_174294.1)
Subcellular
localization
TargetP
other 4  (predict for NP_174294.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with nMAT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT1G80880 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 844428
8.3 PDE247 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837083
8.2 AT3G26540 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 822262
7.6 AT1G22830 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 838888
7.4 AT2G41080 pentatricopeptide (PPR) repeat protein [detail] 818707
6.2 AT1G52620 Pentatricopeptide repeat (PPR) superfamily protein [detail] 841694
6.0 AT4G01400 oligomeric golgi complex subunit-like protein [detail] 28719435
5.8 AT5G57250 Pentatricopeptide repeat (PPR) superfamily protein [detail] 5008310
5.3 AT3G16710 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820923
Coexpressed
gene list		 [Coexpressed gene list for nMAT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260021_at
260021_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260021_at
260021_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260021_at
260021_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839880      
Refseq ID (protein) NP_174294.1 


The preparation time of this page was 0.2 [sec].