[←][→] ath   AT1G30900 Gene
functional annotation
Function   VACUOLAR SORTING RECEPTOR 6  
GO BP
GO:0006896 [list] [network] Golgi to vacuole transport  (19 genes)  IBA  
GO:0006623 [list] [network] protein targeting to vacuole  (36 genes)  IBA TAS  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0017119 [list] [network] Golgi transport complex  (15 genes)  IBA IPI  
GO:0030665 [list] [network] clathrin-coated vesicle membrane  (25 genes)  IEA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IEA  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IBA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
KEGG
Protein NP_174375.1 
BLAST NP_174375.1 
Orthologous [Ortholog page] VSR7 (ath)  LOC4341771 (osa)  LOC7465369 (ppo)  LOC25488210 (mtr)  LOC100252664 (vvi)  LOC100286125 (zma)  LOC100790467 (gma)  LOC100800382 (gma)  LOC101250358 (sly)  LOC103840280 (bra)  LOC103857975 (bra) 
Subcellular
localization
wolf
vacu 4,  golg 3,  golg_plas 3,  plas 2  (predict for NP_174375.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_174375.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
Genes directly connected with VSR6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 VSR5 VACUOLAR SORTING RECEPTOR 5 [detail] 818059
7.3 AT3G51330 Eukaryotic aspartyl protease family protein [detail] 824296
6.7 VSR7 VACUOLAR SORTING RECEPTOR 7 [detail] 827757
5.4 AT5G46230 hypothetical protein (Protein of unknown function, DUF538) [detail] 834665
5.3 AT4G32870 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 829423
5.1 AT1G76980 patatin-like phospholipase domain protein [detail] 844034
4.5 AT3G07570 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein [detail] 819948
Coexpressed
gene list		 [Coexpressed gene list for VSR6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265161_at
265161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265161_at
265161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265161_at
265161_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839974      
Refseq ID (protein) NP_174375.1 


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