[←][→] ath   At1g30970 Gene
functional annotation
Function   zinc finger (C2H2 type) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051568 [list] [network] histone H3-K4 methylation  (15 genes)  IDA  
GO:0009910 [list] [network] negative regulation of flower development  (55 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IMP TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (97 genes)  IPI  
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001077634.1  NP_001322001.1  NP_564369.1 
BLAST NP_001077634.1  NP_001322001.1  NP_564369.1 
Orthologous [Ortholog page] LOC4347855 (osa)  LOC7456069 (ppo)  LOC11415762 (mtr)  LOC18094650 (ppo)  LOC100789368 (gma)  LOC100819009 (gma)  LOC101252640 (sly)  LOC101259016 (sly)  LOC101262702 (sly)  LOC103833415 (bra)  LOC103840278 (bra)  LOC123104830 (tae)  LOC123113111 (tae)  LOC123122640 (tae)  LOC123452012 (hvu) 
Subcellular
localization
wolf
mito 9  (predict for NP_001077634.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001322001.1)
nucl 9  (predict for NP_564369.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001077634.1)
other 9  (predict for NP_001322001.1)
other 9  (predict for NP_564369.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with SUF4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.4 AT5G15270 RNA-binding KH domain-containing protein [detail] 831379
9.1 FCA flowering time control protein FCA [detail] 827323
9.0 MOS11 Protein MODIFIER OF SNC1 11 [detail] 831253
8.9 AT3G21215 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821675
7.9 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 818705
6.7 AT1G03960 Calcium-binding EF hand family protein [detail] 839361
6.1 AT3G32940 RNA-binding KH domain-containing protein [detail] 823058
4.8 AT2G20400 myb-like HTH transcriptional regulator family protein [detail] 816559
Coexpressed
gene list		 [Coexpressed gene list for SUF4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265129_at
265129_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265129_at
265129_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265129_at
265129_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839984      
Refseq ID (protein) NP_001077634.1 
NP_001322001.1 
NP_564369.1 


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