[][] ath   AT1G32080 Gene
functional annotation
Function   membrane protein
GO BP
GO:0042631 [list] [network] cellular response to water deprivation  (35 genes)  IMP  
GO:0010118 [list] [network] stomatal movement  (59 genes)  IMP  
GO:0048527 [list] [network] lateral root development  (117 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
KEGG
Protein NP_564388.1 
BLAST NP_564388.1 
Orthologous [Ortholog page] LOC4324032 (osa)LOC4349509 (osa)LOC25501531 (mtr)LOC100250226 (vvi)LOC100285209 (zma)LOC100383166 (zma)LOC100775540 (gma)LOC100779994 (gma)LOC100807656 (gma)LOC100818144 (gma)LrgB (sly)LOC103840192 (bra)LOC103868912 (bra)
Subcellular
localization
wolf
chlo 5,  plas 3,  E.R. 2  (predict for NP_564388.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_564388.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 4
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath00910 Nitrogen metabolism 3
ath01230 Biosynthesis of amino acids 3
Genes directly connected with LrgB on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
11.1 CRB chloroplast RNA binding protein [detail] 837455
10.5 PnsB1 NDH-dependent cyclic electron flow 1 [detail] 838168
10.3 CSP41A chloroplast stem-loop binding protein of 41 kDa [detail] 825489
9.4 Lhca6 PSI type II chlorophyll a/b-binding protein (Lhca2*1) [detail] 838498
Coexpressed
gene list
[Coexpressed gene list for LrgB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255719_at
255719_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255719_at
255719_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
255719_at
255719_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 840100    
Refseq ID (protein) NP_564388.1 


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