[←][→] ath   At1g36370 Gene
functional annotation
Function   serine hydroxymethyltransferase 7    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0055063 [list] [network] sulfate ion homeostasis  (2 genes)  IMP  
GO:0046500 [list] [network] S-adenosylmethionine metabolic process  (3 genes)  IMP  
GO:0044030 [list] [network] regulation of DNA methylation  (19 genes)  IMP  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00460 [list] [network] Cyanoamino acid metabolism (71 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00670 [list] [network] One carbon pool by folate (21 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_564473.1 
BLAST NP_564473.1 
Orthologous [Ortholog page] SHM6 (ath)  LOC4324773 (osa)  LOC4338868 (osa)  LOC7463188 (ppo)  LOC7469117 (ppo)  LOC11420162 (mtr)  LOC11424199 (mtr)  LOC18094907 (ppo)  LOC100776419 (gma)  LOC100793208 (gma)  LOC100799472 (gma)  LOC100810926 (gma)  LOC101250548 (sly)  LOC103833575 (bra)  LOC103835714 (bra)  LOC103869084 (bra)  LOC123062770 (tae)  LOC123071594 (tae)  LOC123079940 (tae)  LOC123444759 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 3  (predict for NP_564473.1)
Subcellular
localization
TargetP
chlo 2  (predict for NP_564473.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 4
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00460 Cyanoamino acid metabolism 2
Genes directly connected with SHM7 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
19.7 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839418
18.8 APR3 APS reductase 3 [detail] 828288
18.4 ATSDI1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834943
16.0 APR1 APS reductase 1 [detail] 825793
13.6 APR2 5'adenylylphosphosulfate reductase 2 [detail] 842514
13.2 AT5G26220 ChaC-like family protein [detail] 832691
13.1 SULTR4;2 sulfate transporter 4;2 [detail] 820431
12.0 AT3G56200 Transmembrane amino acid transporter family protein [detail] 824786
10.8 SULTR4;1 sulfate transporter 4.1 [detail] 831199
9.7 AT5G40670 PQ-loop repeat family protein / transmembrane family protein [detail] 834067
8.0 AT4G20820 FAD-binding Berberine family protein [detail] 827830
7.5 SULTR1;2 sulfate transporter 1;2 [detail] 844135
6.9 AT1G75280 NmrA-like negative transcriptional regulator family protein [detail] 843865
6.2 SIP1;2 Aquaporin-like superfamily protein [detail] 831947
Coexpressed
gene list		 [Coexpressed gene list for SHM7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260126_at
260126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260126_at
260126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260126_at
260126_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840543      
Refseq ID (protein) NP_564473.1 


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