[←][→] ath   At1g42970 Gene
functional annotation
Function   glyceraldehyde-3-phosphate dehydrogenase B subunit    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019253 [list] [network] reductive pentose-phosphate cycle  (7 genes)  NAS  
GO:0009744 [list] [network] response to sucrose  (74 genes)  IEP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (37 genes)  IDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0047100 [list] [network] glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity  (1 genes)  ISS  
GO:0004365 [list] [network] glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity  (5 genes)  NAS  
GO:1901149 [list] [network] salicylic acid binding  (28 genes)  HDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_174996.1 
BLAST NP_174996.1 
Orthologous [Ortholog page] LOC732571 (gma)  LOC4331495 (osa)  LOC7474559 (ppo)  LOC7494712 (ppo)  LOC11428156 (mtr)  LOC100806482 (gma)  LOC101249445 (sly)  LOC101264004 (sly)  LOC103833307 (bra)  LOC123093580 (tae)  LOC123098850 (tae)  LOC123105786 (tae)  LOC123449789 (hvu) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for NP_174996.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for NP_174996.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 16
ath00710 Carbon fixation in photosynthetic organisms 11
ath00630 Glyoxylate and dicarboxylate metabolism 8
ath00260 Glycine, serine and threonine metabolism 4
ath00195 Photosynthesis 3
Genes directly connected with GAPB on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
19.3 SBPASE sedoheptulose-bisphosphatase [detail] 824746
18.3 FBA2 fructose-bisphosphate aldolase 2 [detail] 830052
15.5 GAPA glyceraldehyde 3-phosphate dehydrogenase A subunit [detail] 822277
14.7 CRB chloroplast RNA binding protein [detail] 837455
14.1 RCA rubisco activase [detail] 818558
14.0 GAPA-2 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [detail] 837848
13.7 HCEF1 high cyclic electron flow 1 [detail] 824572
12.8 PRK phosphoribulokinase [detail] 840098
12.2 FBA1 fructose-bisphosphate aldolase 1 [detail] 816672
12.1 NPQ4 Chlorophyll A-B binding family protein [detail] 841033
12.1 PMDH2 peroxisomal NAD-malate dehydrogenase 2 [detail] 830825
12.0 FNR1 ferredoxin-NADP[+]-oxidoreductase 1 [detail] 836751
11.8 AT1G32470 Single hybrid motif superfamily protein [detail] 840141
11.7 RBCS1A ribulose bisphosphate carboxylase small chain 1A [detail] 843029
10.9 GDCH glycine decarboxylase complex H [detail] 818104
Coexpressed
gene list		 [Coexpressed gene list for GAPB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259625_at
259625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259625_at
259625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259625_at
259625_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840895      
Refseq ID (protein) NP_174996.1 


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