[←][→] ath   At1g43170 Gene
functional annotation
Function   ribosomal protein 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  NAS  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA TAS  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005773 [list] [network] vacuole  (971 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001031146.1  NP_001077671.1  NP_001185148.1  NP_001185149.1  NP_001185150.1  NP_001185151.1  NP_001185152.1  NP_175009.1  NP_973966.1 
BLAST NP_001031146.1  NP_001077671.1  NP_001185148.1  NP_001185149.1  NP_001185150.1  NP_001185151.1  NP_001185152.1  NP_175009.1  NP_973966.1 
Orthologous [Ortholog page] LOC543049 (tae)  RPL3 (sly)  RPL3B (ath)  LOC4349878 (osa)  LOC4351604 (osa)  LOC7468770 (ppo)  LOC7492475 (ppo)  LOC11428007 (mtr)  LOC18111169 (ppo)  LOC25493328 (mtr)  LOC100782902 (gma)  LOC100792174 (gma)  LOC100819132 (gma)  LOC101266871 (sly)  LOC103827694 (bra)  LOC103827695 (bra)  LOC103830735 (bra)  LOC103838748 (bra)  LOC103848547 (bra)  LOC103849653 (bra)  LOC112326952 (ppo)  LOC123091434 (tae)  LOC123096408 (tae)  LOC123102827 (tae)  LOC123111046 (tae)  LOC123120076 (tae)  LOC123399600 (hvu)  LOC123447985 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001031146.1)
cyto 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001077671.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001185148.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001185149.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001185150.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001185151.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001185152.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_175009.1)
chlo 4,  cyto 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_973966.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001031146.1)
mito 7,  other 3  (predict for NP_001077671.1)
other 4,  mito 3  (predict for NP_001185148.1)
other 4,  mito 3  (predict for NP_001185149.1)
other 4,  mito 3  (predict for NP_001185150.1)
other 4,  mito 3  (predict for NP_001185151.1)
other 4,  mito 3  (predict for NP_001185152.1)
other 4,  mito 3  (predict for NP_175009.1)
other 4,  mito 3  (predict for NP_973966.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with RP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.8 EMB3010 Ribosomal protein S6e [detail] 830900
14.5 AT5G15200 Ribosomal protein S4 [detail] 831372
13.3 AT5G20290 Ribosomal protein S8e family protein [detail] 832151
7.8 AT3G62120 Class II aaRS and biotin synthetases superfamily protein [detail] 825385
Coexpressed
gene list		 [Coexpressed gene list for RP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264421_at
264421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264421_at
264421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264421_at
264421_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840916      
Refseq ID (protein) NP_001031146.1 
NP_001077671.1 
NP_001185148.1 
NP_001185149.1 
NP_001185150.1 
NP_001185151.1 
NP_001185152.1 
NP_175009.1 
NP_973966.1 


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