[←][→] ath   At1g43190 Gene
functional annotation
Function   polypyrimidine tract-binding protein 3      
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (21 genes)  IDA  
GO:0006417 [list] [network] regulation of translation  (50 genes)  IEP  
GO CC
GO:0000932 [list] [network] P-body  (32 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001077672.1  NP_001077673.1  NP_175010.2 
BLAST NP_001077672.1  NP_001077673.1  NP_175010.2 
Orthologous [Ortholog page] LOC4325048 (osa)  LOC4338905 (osa)  LOC7467806 (ppo)  LOC7492477 (ppo)  LOC11417846 (mtr)  LOC11440579 (mtr)  LOC25496157 (mtr)  LOC100791570 (gma)  LOC100798234 (gma)  LOC100805732 (gma)  LOC100819672 (gma)  LOC101243754 (sly)  LOC101245436 (sly)  LOC103833140 (bra)  LOC123071547 (tae)  LOC123134734 (tae)  LOC123444795 (hvu)  LOC123446620 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001077672.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001077673.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_175010.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001077672.1)
other 9  (predict for NP_001077673.1)
other 9  (predict for NP_175010.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with PTB3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 AT2G45810 DEA(D/H)-box RNA helicase family protein [detail] 819189
5.5 AT1G07705 NOT2 / NOT3 / NOT5 family [detail] 837284
5.4 TLP3 tubby like protein 3 [detail] 819402
Coexpressed
gene list		 [Coexpressed gene list for PTB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264418_at
264418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264418_at
264418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264418_at
264418_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840918      
Refseq ID (protein) NP_001077672.1 
NP_001077673.1 
NP_175010.2 


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