[←][→] ath   AT1G43190 Gene
functional annotation
Function   polypyrimidine tract-binding protein 3  
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (40 genes)  IDA  
GO:0006417 [list] [network] regulation of translation  (146 genes)  IEP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (56 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_001077672.1  NP_001077673.1  NP_175010.2 
BLAST NP_001077672.1  NP_001077673.1  NP_175010.2 
Orthologous [Ortholog page] LOC4325048 (osa)  LOC4338905 (osa)  LOC7467806 (ppo)  LOC7492477 (ppo)  LOC11417846 (mtr)  LOC11440579 (mtr)  LOC100243429 (vvi)  LOC100249160 (vvi)  LOC100383343 (zma)  LOC100383701 (zma)  LOC100791570 (gma)  LOC100798234 (gma)  LOC100805732 (gma)  LOC100819672 (gma)  LOC101243754 (sly)  LOC101245436 (sly)  LOC103833140 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001077672.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001077673.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_175010.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001077672.1)
other 9  (predict for NP_001077673.1)
other 9  (predict for NP_175010.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath03018 RNA degradation 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03013 RNA transport 2
Genes directly connected with PTB3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT1G72550 tRNA synthetase beta subunit family protein [detail] 843587
5.4 AT1G07705 NOT2 / NOT3 / NOT5 family [detail] 837284
5.4 AT5G45620 Proteasome component (PCI) domain protein [detail] 834602
Coexpressed
gene list		 [Coexpressed gene list for PTB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264418_at
264418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264418_at
264418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264418_at
264418_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840918      
Refseq ID (protein) NP_001077672.1 
NP_001077673.1 
NP_175010.2 


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