[←][→] ath   At1g43790 Gene
functional annotation
Function   tracheary element differentiation-related 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1905177 [list] [network] tracheary element differentiation  (19 genes)  IMP  
GO:2000652 [list] [network] regulation of secondary cell wall biogenesis  (51 genes)  IMP  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (97 genes)  IGI  
GO CC
GO:0044568 [list] [network] secondary cell wall cellulose synthase complex  (1 genes)  IDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  ISS  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_564487.1 
BLAST NP_564487.1 
Orthologous [Ortholog page] TED7 (ath)  LOC4344465 (osa)  LOC7466417 (ppo)  LOC7466831 (ppo)  LOC7485073 (ppo)  LOC11424473 (mtr)  LOC25482406 (mtr)  LOC100787272 (gma)  LOC100788862 (gma)  LOC103828166 (bra)  LOC103847706 (bra)  LOC104648484 (sly)  LOC112325826 (ppo)  LOC112941884 (sly)  LOC123147639 (tae)  LOC123159058 (tae)  LOC123166026 (tae)  LOC123408549 (hvu) 
Subcellular
localization
wolf
chlo 3,  E.R. 2,  extr 1,  vacu 1,  chlo_mito 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_564487.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_564487.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TED6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
24.2 DMP2 transmembrane protein, putative (DUF679 domain membrane protein 2) [detail] 821709
17.9 XCP2 xylem cysteine peptidase 2 [detail] 838677
17.8 GL22 germin-like protein subfamily 2 member 2 precursor [detail] 3766642
17.5 AT4G33810 Glycosyl hydrolase superfamily protein [detail] 829523
16.3 AT1G58070 WEB family protein [detail] 842174
16.1 TED7 tracheary element differentiation-related 7 [detail] 834950
15.9 AT5G40020 Pathogenesis-related thaumatin superfamily protein [detail] 833999
14.3 AT1G63295 Remorin family protein [detail] 10723038
13.9 AT3G49070 transmembrane protein, putative (DUF677) [detail] 824069
13.9 AT1G05310 Pectin lyase-like superfamily protein [detail] 837030
13.4 RXF12 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [detail] 842206
12.8 AT1G70500 Pectin lyase-like superfamily protein [detail] 843386
10.9 AT5G59845 Gibberellin-regulated family protein [detail] 836106
Coexpressed
gene list		 [Coexpressed gene list for TED6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260867_at
260867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260867_at
260867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260867_at
260867_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840976      
Refseq ID (protein) NP_564487.1 


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