[←][→] ath   AT1G43850 Gene
functional annotation
Function   SEUSS transcriptional co-regulator  
GO BP
GO:0046898 [list] [network] response to cycloheximide  (3 genes)  IEP  
GO:0071217 [list] [network] cellular response to external biotic stimulus  (3 genes)  IDA  
GO:0010272 [list] [network] response to silver ion  (4 genes)  IEP  
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (45 genes)  IBA  
GO:0048481 [list] [network] plant ovule development  (57 genes)  IMP  
GO:0009624 [list] [network] response to nematode  (84 genes)  IEP  
GO:0048467 [list] [network] gynoecium development  (91 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IGI  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IBA  
GO:0001666 [list] [network] response to hypoxia  (263 genes)  IEP  
GO:0006974 [list] [network] cellular response to DNA damage stimulus  (329 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IEP  
GO:0009617 [list] [network] response to bacterium  (479 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0009620 [list] [network] response to fungus  (595 genes)  IEP  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IBA IMP  
GO CC
GO:0005667 [list] [network] transcription factor complex  (106 genes)  IBA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0001102 [list] [network] RNA polymerase II activating transcription factor binding  (4 genes)  IBA  
GO:0003712 [list] [network] transcription coregulator activity  (111 genes)  IMP  
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IPI  
GO:0060090 [list] [network] molecular adaptor activity  (662 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001117434.1  NP_175051.1 
BLAST NP_001117434.1  NP_175051.1 
Orthologous [Ortholog page] LOC4350031 (osa)  LOC4350032 (osa)  LOC7466423 (ppo)  LOC25482423 (mtr)  LOC25489760 (mtr)  LOC100241984 (vvi)  LOC100266085 (vvi)  LOC100279192 (zma)  LOC100383819 (zma)  LOC100787437 (gma)  LOC100787573 (gma)  LOC100798031 (gma)  LOC100799771 (gma)  SEU3 (sly)  SEU1 (sly)  LOC103647984 (zma)  LOC103650622 (zma)  LOC103847707 (bra)  LOC103868738 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001117434.1)
nucl 10  (predict for NP_175051.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for NP_001117434.1)
chlo 7,  other 6  (predict for NP_175051.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SEU on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 MEE44 Nucleotidyltransferase family protein [detail] 828214
9.7 AT3G62900 CW-type Zinc Finger [detail] 825465
9.2 PI-4KBETA1 phosphatidylinositol 4-OH kinase beta1 [detail] 836528
7.5 SAP130b Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [detail] 824688
6.6 FLD protein FLOWERING locus D-like protein [detail] 820202
6.3 FRS12 FAR1-related sequence 12 [detail] 832014
Coexpressed
gene list		 [Coexpressed gene list for SEU]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260862_at
260862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260862_at
260862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260862_at
260862_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840981      
Refseq ID (protein) NP_001117434.1 
NP_175051.1 


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