[←][→] ath   AT1G44575 Gene
functional annotation
Function   Chlorophyll A-B binding family protein  
GO BP
GO:0010196 [list] [network] nonphotochemical quenching  (11 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0015979 [list] [network] photosynthesis  (206 genes)  IEA  
GO CC
GO:0009517 [list] [network] PSII associated light-harvesting complex II  (7 genes)  TAS  
GO:0009523 [list] [network] photosystem II  (52 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0051738 [list] [network] xanthophyll binding  (1 genes)  TAS  
GO:0016168 [list] [network] chlorophyll binding  (27 genes)  TAS  
KEGG ath00195 [list] [network] Photosynthesis (76 genes)
Protein NP_001319163.1  NP_175092.1  NP_973971.1 
BLAST NP_001319163.1  NP_175092.1  NP_973971.1 
Orthologous [Ortholog page] LOC542126 (zma)  LOC4324933 (osa)  LOC4337500 (osa)  LOC7463155 (ppo)  LOC11419130 (mtr)  LOC100245393 (vvi)  LOC100779417 (gma)  LOC100807355 (gma)  psbS (sly)  LOC103833131 (bra)  LOC103847722 (bra) 
Subcellular
localization
wolf
chlo 7,  mito 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001319163.1)
chlo 7,  mito 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1,  mito_plas 1  (predict for NP_175092.1)
chlo 5,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_973971.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_001319163.1)
chlo 5,  mito 4  (predict for NP_175092.1)
chlo 5,  mito 4  (predict for NP_973971.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00710 Carbon fixation in photosynthetic organisms 10
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath00195 Photosynthesis 3
ath00010 Glycolysis / Gluconeogenesis 3
Genes directly connected with NPQ4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.0 GAPB glyceraldehyde-3-phosphate dehydrogenase B subunit [detail] 840895
11.6 FBA2 fructose-bisphosphate aldolase 2 [detail] 830052
10.0 SBPASE sedoheptulose-bisphosphatase [detail] 824746
8.4 AT5G38520 alpha/beta-Hydrolases superfamily protein [detail] 833840
7.9 PSB28 photosystem II reaction center PSB28 protein [detail] 828984
7.3 AT2G36145 hypothetical protein [detail] 818187
Coexpressed
gene list		 [Coexpressed gene list for NPQ4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245213_at
245213_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245213_at
245213_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245213_at
245213_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841033      
Refseq ID (protein) NP_001319163.1 
NP_175092.1 
NP_973971.1 


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