[←][→] ath   At1g47270 Gene
functional annotation
Function   tubby like protein 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001185159.1  NP_001322089.1  NP_175160.2 
BLAST NP_001185159.1  NP_001322089.1  NP_175160.2 
Orthologous [Ortholog page] TLP2 (ath)  LOC4330460 (osa)  LOC7471947 (ppo)  LOC7477619 (ppo)  LOC7486584 (ppo)  LOC7495478 (ppo)  LOC11412143 (mtr)  LOC25482157 (mtr)  LOC25501635 (mtr)  LOC100777506 (gma)  LOC100778290 (gma)  LOC100794899 (gma)  LOC100796250 (gma)  LOC100798958 (gma)  LOC100805380 (gma)  LOC101250396 (sly)  LOC101251554 (sly)  LOC101262472 (sly)  LOC101267676 (sly)  LOC103828404 (bra)  LOC103843899 (bra)  LOC103847942 (bra)  LOC123128128 (tae)  LOC123137924 (tae)  LOC123145219 (tae)  LOC123402947 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 5,  cyto 3  (predict for NP_001185159.1)
nucl 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_001322089.1)
nucl 6,  cyto_nucl 5,  cyto 3  (predict for NP_175160.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001185159.1)
chlo 4,  mito 3  (predict for NP_001322089.1)
other 7  (predict for NP_175160.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
Genes directly connected with TLP6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 AT1G19680 RING/U-box superfamily protein [detail] 838555
6.8 GOS11 golgi snare 11 [detail] 838158
6.4 AT4G26400 RING/U-box superfamily protein [detail] 828746
5.5 AT1G68110 ENTH/ANTH/VHS superfamily protein [detail] 843139
5.1 SEC14 Sec14p-like phosphatidylinositol transfer family protein [detail] 830073
Coexpressed
gene list		 [Coexpressed gene list for TLP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260502_at
260502_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260502_at
260502_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260502_at
260502_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841130      
Refseq ID (protein) NP_001185159.1 
NP_001322089.1 
NP_175160.2 


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