[←][→] ath   At1g48030 Gene
functional annotation
Function   mitochondrial lipoamide dehydrogenase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045454 [list] [network] cell redox homeostasis  (27 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0005747 [list] [network] mitochondrial respiratory chain complex I  (56 genes)  IDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005524 [list] [network] ATP binding  (253 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes)
ath00310 [list] [network] Lysine degradation (31 genes)
ath00380 [list] [network] Tryptophan metabolism (64 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00640 [list] [network] Propanoate metabolism (41 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001322047.1  NP_001322048.1  NP_001322049.1  NP_175237.1  NP_849782.1 
BLAST NP_001322047.1  NP_001322048.1  NP_001322049.1  NP_175237.1  NP_849782.1 
Orthologous [Ortholog page] LOC544237 (sly)  LOC547523 (gma)  FLBR (gma)  mtLPD2 (ath)  LOC4326980 (osa)  LOC4337881 (osa)  LOC7471086 (ppo)  LOC7485860 (ppo)  LOC25494137 (mtr)  LOC100788043 (gma)  LOC101245444 (sly)  LOC103869701 (bra)  LOC103871503 (bra)  LOC123038886 (tae)  LOC123108104 (tae)  LOC123114079 (tae)  LOC123180227 (tae)  LOC123180603 (tae)  LOC123189229 (tae)  LOC123409249 (hvu)  LOC123426241 (hvu) 
Subcellular
localization
wolf
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_001322047.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_001322048.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_001322049.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_175237.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_849782.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001322047.1)
mito 9  (predict for NP_001322048.1)
mito 9  (predict for NP_001322049.1)
mito 9  (predict for NP_175237.1)
mito 9  (predict for NP_849782.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00710 Carbon fixation in photosynthetic organisms 6
ath01230 Biosynthesis of amino acids 6
ath00010 Glycolysis / Gluconeogenesis 5
ath00260 Glycine, serine and threonine metabolism 5
Genes directly connected with mtLPD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.6 AT3G60750 Transketolase [detail] 825246
8.6 AT1G11860 Glycine cleavage T-protein family [detail] 837733
8.4 AT1G56190 Phosphoglycerate kinase family protein [detail] 842072
Coexpressed
gene list		 [Coexpressed gene list for mtLPD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260730_at
260730_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260730_at
260730_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260730_at
260730_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841221      
Refseq ID (protein) NP_001322047.1 
NP_001322048.1 
NP_001322049.1 
NP_175237.1 
NP_849782.1 


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