ATTED-II : GeneID search result

[←][→] ath At1g48090 Gene

functional annotation

Function

calcium-dependent lipid-binding family protein

GO BP

GO:0009933 [list] [network] meristem structural organization	(66 genes)	IEA
GO:0010016 [list] [network] shoot system morphogenesis	(224 genes)	IEA
GO:0048646 [list] [network] anatomical structure formation involved in morphogenesis	(266 genes)	IEA
GO:0051301 [list] [network] cell division	(442 genes)	IEA
GO:0070727 [list] [network] cellular macromolecule localization	(458 genes)	IEA
GO:0048589 [list] [network] developmental growth	(1060 genes)	IEA
GO:0050793 [list] [network] regulation of developmental process	(1250 genes)	IEA
GO:0048869 [list] [network] cellular developmental process	(1335 genes)	IEA
GO:0010154 [list] [network] fruit development	(1349 genes)	IEA
GO:0007165 [list] [network] signal transduction	(2054 genes)	ISS

GO CC

GO:0009506 [list] [network] plasmodesma	(871 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	HDA

GO MF

GO:0035091 [list] [network] phosphatidylinositol binding

(94 genes)

ISS

KEGG

Protein

NP_001320405.1 NP_001320406.1 NP_001320407.1 NP_001320408.1 NP_001320409.1 NP_175242.7

BLAST

NP_001320405.1 NP_001320406.1 NP_001320407.1 NP_001320408.1 NP_001320409.1 NP_175242.7

Orthologous

[Ortholog page] LOC4329342 (osa) LOC7498234 (ppo) LOC25494140 (mtr) LOC100782481 (gma) LOC101262246 (sly) LOC103833252 (bra) LOC103871498 (bra) LOC103871499 (bra) LOC123127457 (tae) LOC123137134 (tae) LOC123144534 (tae) LOC123406267 (hvu)

Subcellular
localization
wolf

nucl 4, chlo 2, cyto 1, cysk 1, plas 1, chlo_mito 1, golg_plas 1	(predict for NP_001320405.1)
nucl 4, chlo 2, cyto 1, cysk 1, plas 1, chlo_mito 1, golg_plas 1	(predict for NP_001320406.1)
nucl 4, chlo 2, cyto 1, cysk 1, plas 1, chlo_mito 1, golg_plas 1	(predict for NP_001320407.1)
nucl 4, chlo 2, cyto 1, cysk 1, plas 1, chlo_mito 1, golg_plas 1	(predict for NP_001320408.1)
chlo 3, nucl 2, cyto 2, cyto_nucl 2	(predict for NP_001320409.1)
chlo 4, nucl 2, chlo_mito 2, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for NP_175242.7)

Subcellular
localization
TargetP

other 6, mito 3	(predict for NP_001320405.1)
other 6, mito 3	(predict for NP_001320406.1)
other 6, mito 3	(predict for NP_001320407.1)
other 6, mito 3	(predict for NP_001320408.1)
scret 8	(predict for NP_001320409.1)
scret 8	(predict for NP_175242.7)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

Genes directly connected with AT1G48090 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
14.8	BIG	auxin transport protein (BIG)	[detail]	820398
14.7	AT5G23110	Zinc finger, C3HC4 type (RING finger) family protein	[detail]	832375
13.7	AT2G17930	Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein	[detail]	816303
7.5	AT2G36810	ARM repeat superfamily protein	[detail]	818253
6.9	FAB1B	phosphatidylinositol-4-phosphate 5-kinase family protein	[detail]	820647

Coexpressed
gene list

[Coexpressed gene list for AT1G48090]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260719_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260719_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260719_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841226
Refseq ID (protein)	NP_001320405.1
	NP_001320406.1
	NP_001320407.1
	NP_001320408.1
	NP_001320409.1
	NP_175242.7

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