[←][→] ath   At1g48100 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009831 [list] [network] plant-type cell wall modification involved in multidimensional cell growth  (8 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IDA  
KEGG
Protein NP_175244.1 
BLAST NP_175244.1 
Orthologous [Ortholog page] PG7 (gma)  AT4G01890 (ath)  AT1G02460 (ath)  AT1G56710 (ath)  LOC4326721 (osa)  LOC4326983 (osa)  LOC4338287 (osa)  LOC7455403 (ppo)  LOC7460486 (ppo)  LOC7465225 (ppo)  LOC7466847 (ppo)  LOC7498233 (ppo)  LOC11410191 (mtr)  LOC11412440 (mtr)  LOC11435306 (mtr)  LOC18102624 (ppo)  LOC25493429 (mtr)  LOC100776338 (gma)  LOC100778836 (gma)  LOC100785528 (gma)  LOC100792135 (gma)  LOC100792285 (gma)  LOC100797770 (gma)  LOC100809979 (gma)  LOC100820085 (gma)  LOC101259291 (sly)  LOC101261316 (sly)  LOC101266864 (sly)  LOC103838677 (bra)  LOC103843750 (bra)  LOC103844581 (bra)  LOC103858798 (bra)  LOC103871496 (bra)  LOC123060823 (tae)  LOC123137922 (tae)  LOC123147712 (tae)  LOC123160906 (tae)  LOC123168859 (tae)  LOC123182459 (tae)  LOC123410081 (hvu)  LOC123413542 (hvu) 
Subcellular
localization
wolf
chlo 5,  extr 4,  cyto 1,  vacu 1  (predict for NP_175244.1)
Subcellular
localization
TargetP
mito 4,  scret 3  (predict for NP_175244.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 3
Genes directly connected with AT1G48100 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 820970
8.6 AT1G10640 Pectin lyase-like superfamily protein [detail] 837607
7.2 AT1G60590 Pectin lyase-like superfamily protein [detail] 842353
Coexpressed
gene list		 [Coexpressed gene list for AT1G48100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260727_at
260727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260727_at
260727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260727_at
260727_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841228      
Refseq ID (protein) NP_175244.1 


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