[][] ath   AT1G48160 Gene
functional annotation
Function   signal recognition particle 19 kDa protein, putative / SRP19
GO BP
GO:0006617 [list] [network] SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition  (1 genes)  IBA  
GO CC
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (10 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (9 genes)  IBA  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_001323146.1  NP_175250.1 
BLAST NP_001323146.1  NP_175250.1 
Orthologous [Ortholog page] LOC4340957 (osa)LOC7462510 (ppo)LOC7493484 (ppo)LOC25499231 (mtr)LOC100264739 (vvi)LOC100282410 (zma)LOC100500027 (gma)LOC100801614 (gma)LOC100854647 (vvi)LOC101248030 (sly)LOC103645776 (zma)LOC103833043 (bra)LOC103868692 (bra)
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001323146.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_175250.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001323146.1)
other 7  (predict for NP_175250.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 5
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with AT1G48160 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.5 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit [detail] 818966
7.1 AT5G27430 Signal peptidase subunit [detail] 832802
6.9 AT4G12340 copper ion binding protein [detail] 826843
6.8 AT3G55600 Membrane fusion protein Use1 [detail] 824725
6.7 AT5G64160 plant/protein [detail] 836537
6.6 AT4G17010 transcription factor IIIB [detail] 827409
6.6 AT4G21192 Cytochrome c oxidase biogenesis protein Cmc1-like protein [detail] 5008151
6.2 AT2G16930 Ribosomal protein L27 family protein [detail] 816196
6.0 AT4G14600 Target SNARE coiled-coil domain protein [detail] 827108
5.2 CLC2 Clathrin light chain protein [detail] 818594
5.1 AT1G48200 hypothetical protein [detail] 841240
Coexpressed
gene list
[Coexpressed gene list for AT1G48160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260726_at
260726_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260726_at
260726_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260726_at
260726_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 841235    
Refseq ID (protein) NP_001323146.1 
NP_175250.1 


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