[←][→] ath   AT1G48550 Gene
functional annotation
Function   Vacuolar protein sorting-associated protein 26  
GO BP
GO:0048768 [list] [network] root hair cell tip growth  (23 genes)  IGI  
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (24 genes)  IGI  
GO CC
GO:0030904 [list] [network] retromer complex  (9 genes)  IPI  
GO:0005623 [list] [network] cell  (76 genes)  ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005622 [list] [network] intracellular  (21658 genes)  ISS  
GO MF
KEGG
Protein NP_001185172.1  NP_175288.1 
BLAST NP_001185172.1  NP_175288.1 
Orthologous [Ortholog page] LOC7474825 (ppo)  LOC11422226 (mtr)  LOC100259471 (vvi)  LOC100820593 (gma)  LOC101247599 (sly)  LOC103871466 (bra) 
Subcellular
localization
wolf
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_001185172.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for NP_175288.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for NP_001185172.1)
chlo 4,  mito 3  (predict for NP_175288.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
Genes directly connected with AT1G48550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT1G78910 Pseudouridine synthase family protein [detail] 844229
6.3 AT1G70150 zinc ion binding protein [detail] 843351
6.2 AT1G09280 rhodanese-like domain protein [detail] 837449
5.8 AT4G14145 cytochrome C oxidase assembly protein [detail] 827053
5.2 REV7 DNA-binding HORMA family protein [detail] 838228
4.8 AT3G58530 RNI-like superfamily protein [detail] 825022
4.1 AT4G34540 NmrA-like negative transcriptional regulator family protein [detail] 829605
Coexpressed
gene list		 [Coexpressed gene list for AT1G48550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261299_at
261299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261299_at
261299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261299_at
261299_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841276      
Refseq ID (protein) NP_001185172.1 
NP_175288.1 


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