[←][→] ath   At1g48610 Gene
functional annotation
Function   AT hook motif-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048507 [list] [network] meristem development  (457 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
KEGG
Protein NP_564531.1  NP_973995.1 
BLAST NP_564531.1  NP_973995.1 
Orthologous [Ortholog page] LOC103832990 (bra)  LOC103868674 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for NP_564531.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_973995.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_564531.1)
other 5,  chlo 4  (predict for NP_973995.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G48610 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 EBS PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein [detail] 828303
5.6 AT4G38710 glycine-rich protein [detail] 830027
5.5 HTB1 Histone superfamily protein [detail] 837293
5.3 AT4G21720 defensin-like protein [detail] 828260
4.9 FEY NAD(P)-binding Rossmann-fold superfamily protein [detail] 828890
4.4 PLA2-BETA phospholipase A2-beta [detail] 816488
Coexpressed
gene list		 [Coexpressed gene list for AT1G48610]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261306_at
261306_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261306_at
261306_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261306_at
261306_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841282      
Refseq ID (protein) NP_564531.1 
NP_973995.1 


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