[←][→] ath   At1g48650 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001154411.1  NP_175298.2 
BLAST NP_001154411.1  NP_175298.2 
Orthologous [Ortholog page] AT2G01130 (ath)  LOC4326075 (osa)  LOC7453895 (ppo)  LOC7459805 (ppo)  LOC11410150 (mtr)  LOC25485451 (mtr)  LOC100791006 (gma)  LOC100798684 (gma)  LOC100806141 (gma)  LOC101261705 (sly)  LOC101263393 (sly)  LOC103827605 (bra)  LOC103871455 (bra)  LOC123059825 (tae)  LOC123068291 (tae)  LOC123442414 (hvu) 
Subcellular
localization
wolf
plas 6,  chlo 2,  mito 1,  pero 1  (predict for NP_001154411.1)
plas 6,  chlo 2,  mito 1,  E.R. 1,  pero 1  (predict for NP_175298.2)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001154411.1)
chlo 3  (predict for NP_175298.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03018 RNA degradation 2
Genes directly connected with AT1G48650 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 RGD3 ROOT GROWTH DEFECTIVE 3 [detail] 824595
6.7 XRN2 exoribonuclease 2 [detail] 834261
6.7 EX1 UvrB/UvrC domain protein (DUF3506) [detail] 829504
Coexpressed
gene list		 [Coexpressed gene list for AT1G48650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256140_at
256140_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256140_at
256140_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256140_at
256140_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841287      
Refseq ID (protein) NP_001154411.1 
NP_175298.2 


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