[←][→] ath   AT1G49530 Gene
functional annotation
Function   geranylgeranyl pyrophosphate synthase 6  
GO BP
GO:0033386 [list] [network] geranylgeranyl diphosphate biosynthetic process  (11 genes)  IEA  
GO:0033384 [list] [network] geranyl diphosphate biosynthetic process  (13 genes)  IEA  
GO:0045337 [list] [network] farnesyl diphosphate biosynthetic process  (15 genes)  IEA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (171 genes)  TAS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004337 [list] [network] geranyltranstransferase activity  (14 genes)  IEA  
GO:0004161 [list] [network] dimethylallyltranstransferase activity  (15 genes)  IEA  
GO:0004311 [list] [network] farnesyltranstransferase activity  (18 genes)  IBA IDA IGI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (60 genes)
Protein NP_175376.1 
BLAST NP_175376.1 
Orthologous
Subcellular
localization
wolf
mito 4,  chlo 4,  vacu 1  (predict for NP_175376.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_175376.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
Genes directly connected with GGPS6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G49520 SWIB complex BAF60b domain-containing protein [detail] 841376
4.2 AT3G62010 metal ion-binding protein [detail] 825374
4.1 MC7 metacaspase 7 [detail] 844269
Coexpressed
gene list		 [Coexpressed gene list for GGPS6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262391_at
262391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262391_at
262391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262391_at
262391_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841377      
Refseq ID (protein) NP_175376.1 


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