[←][→] ath   At1g49600 Gene
functional annotation
Function   RNA-binding protein 47A    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034605 [list] [network] cellular response to heat  (49 genes)  ISS  
GO:0007389 [list] [network] pattern specification process  (295 genes)  IEA  
GO:0044283 [list] [network] small molecule biosynthetic process  (765 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (28 genes)  ISS  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM ISS  
GO MF
GO:0008143 [list] [network] poly(A) binding  (12 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001321909.1  NP_001321910.1  NP_175383.1 
BLAST NP_001321909.1  NP_001321910.1  NP_175383.1 
Orthologous [Ortholog page] LOC543919 (sly)  RBP47B (ath)  RBP47C (ath)  RBP47C' (ath)  LOC4329718 (osa)  LOC4347299 (osa)  LOC7457520 (ppo)  LOC7462894 (ppo)  LOC11432878 (mtr)  LOC11446957 (mtr)  LOC18097813 (ppo)  LOC18104937 (ppo)  LOC25482078 (mtr)  LOC100777830 (gma)  LOC100785454 (gma)  LOC100798089 (gma)  LOC100801446 (gma)  LOC100814564 (gma)  LOC100819523 (gma)  LOC101247965 (sly)  LOC101261707 (sly)  LOC103832915 (bra)  LOC103837516 (bra)  LOC103839291 (bra)  LOC103859796 (bra)  LOC103868789 (bra)  LOC103869491 (bra)  LOC103871384 (bra)  LOC123045609 (tae)  LOC123053450 (tae)  LOC123104011 (tae)  LOC123112245 (tae)  LOC123121759 (tae)  LOC123144572 (tae)  LOC123189357 (tae)  LOC123398803 (hvu)  LOC123406290 (hvu)  LOC123426861 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001321909.1)
nucl 6,  chlo 4  (predict for NP_001321910.1)
nucl 6,  mito 3  (predict for NP_175383.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for NP_001321909.1)
other 6,  chlo 6  (predict for NP_001321910.1)
other 6,  chlo 6  (predict for NP_175383.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
Genes directly connected with RBP47A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 PAB8 poly(A) binding protein 8 [detail] 841399
7.7 AT5G16070 TCP-1/cpn60 chaperonin family protein [detail] 831464
7.6 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6 family protein [detail] 832071
Coexpressed
gene list		 [Coexpressed gene list for RBP47A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261603_at
261603_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261603_at
261603_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261603_at
261603_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841384      
Refseq ID (protein) NP_001321909.1 
NP_001321910.1 
NP_175383.1 


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