[←][→] ath   At1g49850 Gene
functional annotation
Function   RING/U-box superfamily protein      
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_564556.1 
BLAST NP_564556.1 
Orthologous [Ortholog page] RNF12 (gma)  LOC4332001 (osa)  LOC18095179 (ppo)  LOC18102089 (ppo)  LOC25485358 (mtr)  LOC100814695 (gma)  LOC101244425 (sly)  LOC103832912 (bra)  LOC103849551 (bra)  LOC123085014 (tae)  LOC123093052 (tae)  LOC123098335 (tae)  LOC123449376 (hvu) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_564556.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_564556.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
Genes directly connected with AT1G49850 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 AT4G31410 E3 ubiquitin-protein ligase, putative (DUF1644) [detail] 829268
5.6 AT2G19350 transmembrane protein (DUF872) [detail] 816452
5.5 VPS28-2 Vacuolar protein sorting-associated protein VPS28 family protein [detail] 825842
4.9 AT1G58110 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 842178
Coexpressed
gene list		 [Coexpressed gene list for AT1G49850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259816_at
259816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259816_at
259816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259816_at
259816_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841408      
Refseq ID (protein) NP_564556.1 


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