[←][→] ath   AT1G51380 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001322292.1  NP_001322293.1  NP_001322294.1  NP_175549.1 
BLAST NP_001322292.1  NP_001322293.1  NP_001322294.1  NP_175549.1 
Orthologous [Ortholog page] LOC732749 (zma)  EIF4A-III (ath)  LOC4326580 (osa)  LOC4333273 (osa)  LOC7492084 (ppo)  LOC25488222 (mtr)  LOC100255368 (vvi)  LOC100795032 (gma)  LOC100800020 (gma)  LOC101256152 (sly)  LOC103627913 (zma)  LOC103832857 (bra)  LOC103836967 (bra)  LOC103859825 (bra)  LOC103864513 (bra)  LOC103869424 (bra) 
Subcellular
localization
wolf
cyto 8,  nucl 2  (predict for NP_001322292.1)
cyto 6,  chlo 1,  nucl 1  (predict for NP_001322293.1)
cyto 6,  nucl 3  (predict for NP_001322294.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_175549.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001322292.1)
other 9  (predict for NP_001322293.1)
other 9  (predict for NP_001322294.1)
other 9  (predict for NP_175549.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT1G51380 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT4G36580 AAA-type ATPase family protein [detail] 829810
9.2 AT5G14580 polyribonucleotide nucleotidyltransferase [detail] 831309
9.1 WDR55 transducin family protein / WD-40 repeat family protein [detail] 817987
7.8 AT1G15870 Mitochondrial glycoprotein family protein [detail] 838157
6.7 TOM7-2 translocase of outer membrane 7 kDa subunit 2 [detail] 842727
5.5 DEG14 Trypsin family protein with PDZ domain-containing protein [detail] 832828
Coexpressed
gene list		 [Coexpressed gene list for AT1G51380]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265147_at
265147_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265147_at
265147_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265147_at
265147_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841562      
Refseq ID (protein) NP_001322292.1 
NP_001322293.1 
NP_001322294.1 
NP_175549.1 


The preparation time of this page was 0.2 [sec].