[←][→] ath   At1g52160 Gene
functional annotation
Function   tRNAse Z3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034414 [list] [network] tRNA 3'-trailer cleavage, endonucleolytic  (4 genes)  IDA  
GO:0042780 [list] [network] tRNA 3'-end processing  (6 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0042781 [list] [network] 3'-tRNA processing endoribonuclease activity  (4 genes)  IDA  
KEGG
Protein NP_175628.2 
BLAST NP_175628.2 
Orthologous [Ortholog page] TRZ4 (ath)  LOC4324278 (osa)  LOC7475087 (ppo)  LOC11427220 (mtr)  LOC100784996 (gma)  LOC100786011 (gma)  LOC101243871 (sly)  LOC101245927 (sly)  LOC101265382 (sly)  LOC103869840 (bra)  LOC103871232 (bra)  LOC123060809 (tae)  LOC123069373 (tae)  LOC123077884 (tae)  LOC123443267 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 1,  mito 1  (predict for NP_175628.2)
Subcellular
localization
TargetP
mito 6,  chlo 6  (predict for NP_175628.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03020 RNA polymerase 4
Genes directly connected with TRZ3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT1G04945 HIT-type Zinc finger family protein [detail] 5007664
8.6 AT2G18900 Transducin/WD40 repeat-like superfamily protein [detail] 816406
8.6 NRPA2 nuclear RNA polymerase A2 [detail] 839872
8.4 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 817731
6.8 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [detail] 816921
Coexpressed
gene list		 [Coexpressed gene list for TRZ3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259835_at
259835_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259835_at
259835_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259835_at
259835_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841647      
Refseq ID (protein) NP_175628.2 


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