[←][→] ath   At1g53200 Gene
functional annotation
Function   TAF RNA polymerase I subunit A    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006360 [list] [network] transcription by RNA polymerase I  (2 genes)  IEA  
GO CC
GO:0000120 [list] [network] RNA polymerase I transcription regulator complex  (2 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_175728.2  NP_974015.1 
BLAST NP_175728.2  NP_974015.1 
Orthologous [Ortholog page] LOC4340633 (osa)  LOC7454598 (ppo)  LOC25487276 (mtr)  LOC100795720 (gma)  LOC100800114 (gma)  LOC100819662 (gma)  LOC101256747 (sly)  LOC103868447 (bra)  LOC103871151 (bra)  LOC123108115 (tae)  LOC123149269 (tae)  LOC123162054 (tae)  LOC123164638 (tae)  LOC123413125 (hvu)  LOC123413127 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_175728.2)
nucl 4,  cyto 4,  chlo 1,  cysk 1,  golg 1  (predict for NP_974015.1)
Subcellular
localization
TargetP
other 9  (predict for NP_175728.2)
other 8  (predict for NP_974015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with AT1G53200 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 832649
8.4 TOZ Transducin family protein / WD-40 repeat family protein [detail] 831538
7.9 AT5G22840 Protein kinase superfamily protein [detail] 832347
6.3 EMB2766 structural constituent of nuclear pore [detail] 819108
6.1 AT5G07950 uncharacterized protein [detail] 830689
Coexpressed
gene list		 [Coexpressed gene list for AT1G53200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260641_at
260641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260641_at
260641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260641_at
260641_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841754      
Refseq ID (protein) NP_175728.2 
NP_974015.1 


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