ATTED-II : GeneID search result

[←][→] ath At1g53460 Gene

functional annotation

Function

craniofacial development protein

GO BP

GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem	(287 genes)	IEA
GO:0009790 [list] [network] embryo development	(780 genes)	IEA
GO:0044085 [list] [network] cellular component biogenesis	(1358 genes)	IEA

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

ISM

GO MF

KEGG

Protein

NP_564632.1

BLAST

NP_564632.1

Orthologous

[Ortholog page] LOC4327077 (osa) LOC7459109 (ppo) LOC11406206 (mtr) LOC11409278 (mtr) LOC100796418 (gma) LOC101247991 (sly) LOC101258412 (sly) LOC101258699 (sly) LOC103832667 (bra) LOC123058095 (tae) LOC123065119 (tae) LOC123074259 (tae) LOC123439598 (hvu)

Subcellular
localization
wolf

chlo 5, chlo_mito 4, mito 3, cyto_mito 2

(predict for NP_564632.1)

Subcellular
localization
TargetP

mito 3

(predict for NP_564632.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G53460 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.0	AT2G02880	mucin-like protein	[detail]	814819
7.0	AT3G56510	RNA-binding (RRM/RBD/RNP motifs) family protein	[detail]	824818
6.8	AT5G46920	Intron maturase, type II family protein	[detail]	834738
6.2	AT5G65490	suppressor-like protein	[detail]	836674

Coexpressed
gene list

[Coexpressed gene list for AT1G53460]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260981_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260981_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260981_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841781
Refseq ID (protein)	NP_564632.1

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