[][] ath   AT1G53500 Gene
functional annotation
Function   NAD-dependent epimerase/dehydratase family protein
GO BP
GO:0010253 [list] [network] UDP-rhamnose biosynthetic process  (4 genes)  IDA  
GO:0010192 [list] [network] mucilage biosynthetic process  (30 genes)  IMP  
GO:0010214 [list] [network] seed coat development  (44 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0010489 [list] [network] UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity  (2 genes)  TAS  
GO:0010490 [list] [network] UDP-4-keto-rhamnose-4-keto-reductase activity  (2 genes)  TAS  
GO:0010280 [list] [network] UDP-L-rhamnose synthase activity  (3 genes)  IDA ISS  
GO:0050377 [list] [network] UDP-glucose 4,6-dehydratase activity  (3 genes)  IDA  
GO:0008460 [list] [network] dTDP-glucose 4,6-dehydratase activity  (4 genes)  IEA  
KEGG ath00520 [list] [network] Amino sugar and nucleotide sugar metabolism (131 genes)
Protein NP_564633.2 
BLAST NP_564633.2 
Orthologous [Ortholog page] RHM3 (ath)RHM1 (ath)LOC4332425 (osa)LOC11434660 (mtr)LOC25479851 (mtr)LOC25487192 (mtr)sm1 (zma)LOC100253745 (vvi)LOC100260586 (vvi)LOC100285088 (zma)LOC100775641 (gma)LOC100776241 (gma)LOC100785885 (gma)LOC100789909 (gma)LOC100803187 (gma)LOC101248505 (sly)LOC101249663 (sly)LOC101257808 (sly)LOC103634467 (zma)LOC103832335 (bra)LOC103868430 (bra)LOC103869992 (bra)LOC103871125 (bra)LOC103872486 (bra)LOC109939248 (zma)
Subcellular
localization
wolf
extr 3,  chlo 2,  cyto 2,  nucl 1,  E.R. 1,  pero 1,  cysk 1,  cysk_nucl 1  (predict for NP_564633.2)
Subcellular
localization
TargetP
other 8  (predict for NP_564633.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with MUM4 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.7 RHM3 rhamnose biosynthesis 3 [detail] 820707
6.8 AT5G61240 Leucine-rich repeat (LRR) family protein [detail] 836245
6.0 AT1G62020 Coatomer, alpha subunit [detail] 842497
5.0 PAO3 polyamine oxidase 3 [detail] 825074
Coexpressed
gene list
[Coexpressed gene list for MUM4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260985_at
260985_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260985_at
260985_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260985_at
260985_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 841785    
Refseq ID (protein) NP_564633.2 


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