[←][→] ath   At1g53800 Gene
functional annotation
Function   muscle M-line assembly protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0043412 [list] [network] macromolecule modification  (1856 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
KEGG
Protein NP_001031183.1  NP_001322869.1  NP_001322870.1  NP_564641.2 
BLAST NP_001031183.1  NP_001322869.1  NP_001322870.1  NP_564641.2 
Orthologous [Ortholog page] LOC4348255 (osa)  LOC7471609 (ppo)  LOC18094662 (ppo)  LOC25499752 (mtr)  LOC100306569 (gma)  LOC100812708 (gma)  LOC101243687 (sly)  LOC103848509 (bra)  LOC103871109 (bra)  LOC123042354 (tae)  LOC123118427 (tae)  LOC123180894 (tae)  LOC123428665 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for NP_001031183.1)
chlo 6,  nucl 4  (predict for NP_001322869.1)
nucl 9  (predict for NP_001322870.1)
chlo 6,  nucl 4  (predict for NP_564641.2)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001031183.1)
other 5,  chlo 3  (predict for NP_001322869.1)
other 6,  mito 3  (predict for NP_001322870.1)
chlo 5,  other 3  (predict for NP_564641.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G53800 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 DUF5 polyribonucleotide phosphorylase, putative (DOMAIN OF UNKNOWN FUNCTION 724 5) [detail] 819335
7.8 PTAC6 plastid transcriptionally active 6 [detail] 838761
7.5 PHYLLO 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein [detail] 843222
7.4 AT3G25680 SLH domain protein [detail] 822156
7.2 AT4G15810 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 827262
Coexpressed
gene list		 [Coexpressed gene list for AT1G53800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262199_at
262199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262199_at
262199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262199_at
262199_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841817      
Refseq ID (protein) NP_001031183.1 
NP_001322869.1 
NP_001322870.1 
NP_564641.2 


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