[←][→] ath   At1g54320 Gene
functional annotation
Function   LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006508 [list] [network] proteolysis  (413 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0044255 [list] [network] cellular lipid metabolic process  (822 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_564656.1 
BLAST NP_564656.1 
Orthologous [Ortholog page] ALIS1 (ath)  AT1G16360 (ath)  ALIS5 (ath)  LOC4328458 (osa)  LOC4331429 (osa)  LOC4339407 (osa)  LOC4341775 (osa)  LOC4347852 (osa)  LOC7460668 (ppo)  LOC7464559 (ppo)  LOC11420974 (mtr)  LOC11439547 (mtr)  LOC18097568 (ppo)  LOC18106551 (ppo)  LOC25486991 (mtr)  LOC100779116 (gma)  LOC100779539 (gma)  LOC100784467 (gma)  LOC100791515 (gma)  LOC100793838 (gma)  LOC100796102 (gma)  LOC100806200 (gma)  LOC101256591 (sly)  LOC101262267 (sly)  LOC103830483 (bra)  LOC103832529 (bra)  LOC103842852 (bra)  LOC103859463 (bra)  LOC103870230 (bra)  LOC120577710 (mtr)  LOC123064161 (tae)  LOC123093796 (tae)  LOC123096748 (tae)  LOC123099030 (tae)  LOC123132551 (tae)  LOC123136626 (tae)  LOC123144136 (tae)  LOC123149238 (tae)  LOC123160180 (tae)  LOC123164829 (tae)  LOC123400983 (hvu)  LOC123413665 (hvu)  LOC123417752 (hvu)  LOC123449898 (hvu) 
Subcellular
localization
wolf
plas 5,  golg_plas 4,  golg 2,  vacu 1  (predict for NP_564656.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564656.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G54320 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 AT3G08650 ZIP metal ion transporter family [detail] 820012
7.5 AT5G43100 Eukaryotic aspartyl protease family protein [detail] 834326
6.9 AT4G15470 Bax inhibitor-1 family protein [detail] 827218
6.9 AT3G59660 C2 domain-containing protein / GRAM domain-containing protein [detail] 825135
6.8 AT4G38260 transport/golgi organization-like protein (DUF833) [detail] 829983
6.7 PUX2 plant UBX domain-containing protein 2 [detail] 814694
6.7 AT3G08930 LMBR1-like membrane protein [detail] 820042
6.5 AT5G18900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 832008
5.5 AT1G12760 Zinc finger, C3HC4 type (RING finger) family protein [detail] 837832
5.2 CIPK23 CBL-interacting protein kinase 23 [detail] 839907
4.8 AT3G05990 Leucine-rich repeat (LRR) family protein [detail] 819770
Coexpressed
gene list		 [Coexpressed gene list for AT1G54320]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262960_at
262960_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262960_at
262960_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262960_at
262960_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841873      
Refseq ID (protein) NP_564656.1 


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