[←][→] ath   AT1G54320 Gene
functional annotation
Function   LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein  
GO BP
GO CC
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IEA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_564656.1 
BLAST NP_564656.1 
Orthologous [Ortholog page] ALIS1 (ath)  AT1G16360 (ath)  ALIS5 (ath)  LOC4328458 (osa)  LOC4331429 (osa)  LOC4339407 (osa)  LOC4341775 (osa)  LOC7460668 (ppo)  LOC7464559 (ppo)  LOC11420974 (mtr)  LOC11439547 (mtr)  LOC25486991 (mtr)  LOC100193072 (zma)  LOC100242202 (vvi)  LOC100252226 (vvi)  LOC100267404 (vvi)  LOC100282354 (zma)  LOC100283092 (zma)  LOC100284477 (zma)  LOC100384483 (zma)  LOC100779539 (gma)  LOC100784467 (gma)  LOC100791515 (gma)  LOC100793838 (gma)  LOC100796102 (gma)  LOC100806200 (gma)  LOC100854990 (vvi)  LOC101256591 (sly)  LOC101262267 (sly)  LOC103628328 (zma)  LOC103830483 (bra)  LOC103832529 (bra)  LOC103842852 (bra)  LOC103859463 (bra)  LOC103870230 (bra) 
Subcellular
localization
wolf
plas 5,  golg_plas 4,  golg 2,  vacu 1  (predict for NP_564656.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564656.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
Genes directly connected with AT1G54320 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 AT3G56310 Melibiase family protein [detail] 824798
7.4 AT3G08650 ZIP metal ion transporter family [detail] 820012
6.7 AT3G59660 C2 domain-containing protein / GRAM domain-containing protein [detail] 825135
6.7 SC3 secretory carrier 3 [detail] 842418
6.2 AT3G08930 LMBR1-like membrane protein [detail] 820042
6.2 AT5G18900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 832008
6.1 AT3G66654 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 819847
6.1 AT5G43100 Eukaryotic aspartyl protease family protein [detail] 834326
5.8 VSR4 vacuolar sorting receptor 4 [detail] 815960
5.7 VAD1 GRAM domain family protein [detail] 839232
Coexpressed
gene list		 [Coexpressed gene list for AT1G54320]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262960_at
262960_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262960_at
262960_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262960_at
262960_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841873      
Refseq ID (protein) NP_564656.1 


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