[←][→] ath   AT1G54690 Gene
functional annotation
Function   gamma histone  
GO BP
GO:0006325 [list] [network] chromatin organization  (338 genes)  IBA  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0000790 [list] [network] nuclear chromatin  (80 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IDA ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
KEGG
Protein NP_175868.1 
BLAST NP_175868.1 
Orthologous [Ortholog page] H2AXA (ath)  LOC4333939 (osa)  LOC4352398 (osa)  LOC7473316 (ppo)  LOC11423173 (mtr)  LOC11430690 (mtr)  LOC11434641 (mtr)  LOC11443483 (mtr)  LOC100254490 (vvi)  LOC100257319 (vvi)  LOC100259607 (vvi)  LOC100305465 (gma)  LOC100787899 (gma)  LOC100818215 (gma)  LOC101248985 (sly)  LOC101255365 (sly)  LOC101256806 (sly)  LOC101264975 (sly)  LOC103625929 (zma)  LOC103640970 (zma)  LOC103643930 (zma)  LOC103836372 (bra)  LOC103871626 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for NP_175868.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_175868.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with GAMMA-H2AX on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 H2AXA Histone superfamily protein [detail] 837409
8.9 HTB1 Histone superfamily protein [detail] 837293
8.6 HTA6 histone H2A 6 [detail] 836109
Coexpressed
gene list		 [Coexpressed gene list for GAMMA-H2AX]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264188_at
264188_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264188_at
264188_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264188_at
264188_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841910      
Refseq ID (protein) NP_175868.1 


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