ATTED-II : GeneID search result

[←][→] ath At1g54730 Gene

functional annotation

Function

Major facilitator superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(2529 genes)	ISM
GO:0005739 [list] [network] mitochondrion	(4228 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5004 genes)	ISM

GO MF

GO:0015144 [list] [network] carbohydrate transmembrane transporter activity

(87 genes)

ISS

KEGG

Protein

NP_001319233.1 NP_001323194.1 NP_001323195.1 NP_001323196.1 NP_001323197.1 NP_001323198.1 NP_001323199.1 NP_001323200.1 NP_001323201.1 NP_564666.1 NP_850964.1

BLAST

NP_001319233.1 NP_001323194.1 NP_001323195.1 NP_001323196.1 NP_001323197.1 NP_001323198.1 NP_001323199.1 NP_001323200.1 NP_001323201.1 NP_564666.1 NP_850964.1

Orthologous

[Ortholog page] st3 (sly) AT2G48020 (ath) AT3G05150 (ath) AT5G18840 (ath) LOC4332900 (osa) LOC4332901 (osa) LOC7466267 (ppo) LOC7473880 (ppo) LOC7481451 (ppo) LOC7498008 (ppo) LOC9266436 (osa) LOC11408464 (mtr) LOC11423172 (mtr) LOC11446875 (mtr) LOC18098814 (ppo) LOC25499057 (mtr) LOC25499088 (mtr) LOC100775487 (gma) LOC100780074 (gma) LOC100785248 (gma) LOC100786465 (gma) LOC100787004 (gma) LOC100817150 (gma) LOC100819822 (gma) LOC100820396 (gma) LOC100820441 (gma) LOC101247255 (sly) LOC101247766 (sly) LOC101255139 (sly) SFP5 (sly) LOC103829488 (bra) LOC103844450 (bra) LOC103845802 (bra) LOC103850020 (bra) LOC104644300 (sly) LOC123043298 (tae) LOC123043299 (tae) LOC123104355 (tae) LOC123116532 (tae) LOC123122124 (tae) LOC123131143 (tae) LOC123138851 (tae) LOC123145691 (tae) LOC123145819 (tae) LOC123172255 (tae) LOC123172258 (tae) LOC123176319 (tae) LOC123176446 (tae) LOC123187118 (tae) LOC123187121 (tae) LOC123400969 (hvu) LOC123424458 (hvu)

Subcellular
localization
wolf

plas 4, vacu 3, golg_plas 3	(predict for NP_001319233.1)
vacu 4, plas 3, golg 2, E.R._plas 2	(predict for NP_001323194.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323195.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323196.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323197.1)
plas 4, vacu 3, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323198.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323199.1)
plas 4, vacu 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323200.1)
plas 4, vacu 3, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323201.1)
chlo 4, E.R. 2, nucl 1, E.R._plas 1	(predict for NP_564666.1)
plas 4, vacu 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_850964.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001319233.1)
other 9	(predict for NP_001323194.1)
other 9	(predict for NP_001323195.1)
other 9	(predict for NP_001323196.1)
other 9	(predict for NP_001323197.1)
other 9	(predict for NP_001323198.1)
other 9	(predict for NP_001323199.1)
other 9	(predict for NP_001323200.1)
other 9	(predict for NP_001323201.1)
other 6, mito 4	(predict for NP_564666.1)
other 9	(predict for NP_850964.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G54730 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.5	AT5G45760	Transducin/WD40 repeat-like superfamily protein	[detail]	834615
4.8	ABCG3	ABC-2 type transporter family protein	[detail]	817351
4.6	AT3G05160	Major facilitator superfamily protein	[detail]	819679

Coexpressed
gene list

[Coexpressed gene list for AT1G54730]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264191_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264191_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264191_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841914
Refseq ID (protein)	NP_001319233.1
	NP_001323194.1
	NP_001323195.1
	NP_001323196.1
	NP_001323197.1
	NP_001323198.1
	NP_001323199.1
	NP_001323200.1
	NP_001323201.1
	NP_564666.1
	NP_850964.1

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