ATTED-II : GeneID search result

[←][→] ath AT1G54730 Gene

functional annotation

Function

Major facilitator superfamily protein

GO BP

GO CC

GO:0005887 [list] [network] integral component of plasma membrane	(171 genes)	IBA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	ISM
GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0005351 [list] [network] carbohydrate:proton symporter activity	(45 genes)	IBA
GO:0015144 [list] [network] carbohydrate transmembrane transporter activity	(94 genes)	ISS

KEGG

Protein

NP_001319233.1 NP_001323194.1 NP_001323195.1 NP_001323196.1 NP_001323197.1 NP_001323198.1 NP_001323199.1 NP_001323200.1 NP_001323201.1 NP_564666.1 NP_850964.1

BLAST

NP_001319233.1 NP_001323194.1 NP_001323195.1 NP_001323196.1 NP_001323197.1 NP_001323198.1 NP_001323199.1 NP_001323200.1 NP_001323201.1 NP_564666.1 NP_850964.1

Orthologous

[Ortholog page] LOC7473880 (ppo) LOC11423172 (mtr) LOC100245278 (vvi) LOC100247058 (vvi) LOC100267582 (vvi) LOC100272520 (zma) LOC100279760 (zma) LOC100780074 (gma) LOC100786465 (gma) LOC100817150 (gma) LOC101255139 (sly) LOC103844450 (bra) LOC104881447 (vvi)

Subcellular
localization
wolf

plas 4, vacu 3, golg_plas 3	(predict for NP_001319233.1)
vacu 4, plas 3, golg 2, E.R._plas 2	(predict for NP_001323194.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323195.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323196.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323197.1)
plas 4, vacu 3, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323198.1)
plas 4, vacu 3, golg_plas 3	(predict for NP_001323199.1)
plas 4, vacu 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323200.1)
plas 4, vacu 3, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_001323201.1)
chlo 4, E.R. 2, nucl 1, E.R._plas 1	(predict for NP_564666.1)
plas 4, vacu 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for NP_850964.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001319233.1)
other 9	(predict for NP_001323194.1)
other 9	(predict for NP_001323195.1)
other 9	(predict for NP_001323196.1)
other 9	(predict for NP_001323197.1)
other 9	(predict for NP_001323198.1)
other 9	(predict for NP_001323199.1)
other 9	(predict for NP_001323200.1)
other 9	(predict for NP_001323201.1)
other 6, mito 4	(predict for NP_564666.1)
other 9	(predict for NP_850964.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

Genes directly connected with AT1G54730 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.2	AT1G62914	pentatricopeptide (PPR) repeat-containing protein	[detail]	10723105
5.1	AT2G17525	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	816259
5.0	AT5G15270	RNA-binding KH domain-containing protein	[detail]	831379
4.4	AT1G49730	Protein kinase superfamily protein	[detail]	841396

Coexpressed
gene list

[Coexpressed gene list for AT1G54730]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264191_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264191_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264191_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841914
Refseq ID (protein)	NP_001319233.1
	NP_001323194.1
	NP_001323195.1
	NP_001323196.1
	NP_001323197.1
	NP_001323198.1
	NP_001323199.1
	NP_001323200.1
	NP_001323201.1
	NP_564666.1
	NP_850964.1

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