[←][→] ath   At1g54780 Gene
functional annotation
Function   thylakoid lumen 18.3 kDa protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0016311 [list] [network] dephosphorylation  (101 genes)  IDA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0003993 [list] [network] acid phosphatase activity  (42 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_564667.1 
BLAST NP_564667.1 
Orthologous [Ortholog page] LOC4338729 (osa)  LOC7473306 (ppo)  LOC11405923 (mtr)  LOC18098830 (ppo)  LOC100778682 (gma)  LOC100813027 (gma)  LOC101258104 (sly)  LOC103844487 (bra)  LOC123055054 (tae)  LOC123132131 (tae)  LOC123441764 (hvu) 
Subcellular
localization
wolf
chlo 6,  mito 1,  plas 1,  vacu 1,  golg 1,  cyto_mito 1,  golg_plas 1  (predict for NP_564667.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564667.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 3
ath00190 Oxidative phosphorylation 2
Genes directly connected with TLP18.3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.1 PSBP-1 photosystem II subunit P-1 [detail] 837178
12.8 ATPC1 ATPase, F1 complex, gamma subunit protein [detail] 825797
12.7 PSBY photosystem II BY [detail] 843099
7.9 TRXF2 thioredoxin F2 [detail] 831501
Coexpressed
gene list		 [Coexpressed gene list for TLP18.3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264185_at
264185_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264185_at
264185_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264185_at
264185_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841919      
Refseq ID (protein) NP_564667.1 


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