[←][→] ath   AT1G55000 Gene
functional annotation
Function   peptidoglycan-binding LysM domain-containing protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO MF
KEGG
Protein NP_001031192.1  NP_001031193.1  NP_564673.1 
BLAST NP_001031192.1  NP_001031193.1  NP_564673.1 
Orthologous [Ortholog page] LOC4333817 (osa)  LOC7473286 (ppo)  LOC11440777 (mtr)  LOC100242661 (vvi)  LOC100284442 (zma)  LOC100783874 (gma)  LOC100803417 (gma)  LOC101243744 (sly)  LOC103848274 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_001031192.1)
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_001031193.1)
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_564673.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031192.1)
scret 9  (predict for NP_001031193.1)
scret 9  (predict for NP_564673.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G55000 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 VTI1B Vesicle transport v-SNARE family protein [detail] 839208
5.9 LCL1 LHY/CCA1-like 1 [detail] 831766
5.6 APG5 autophagy protein Apg5 family [detail] 831594
Coexpressed
gene list		 [Coexpressed gene list for AT1G55000]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256353_at
256353_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256353_at
256353_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256353_at
256353_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841942      
Refseq ID (protein) NP_001031192.1 
NP_001031193.1 
NP_564673.1 


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