[←][→] ath   At1g55360 Gene
functional annotation
Function   tRNA-splicing ligase (DUF239)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000910 [list] [network] cytokinesis  (150 genes)  IEA  
GO:0098771 [list] [network] inorganic ion homeostasis  (252 genes)  IEA  
GO:0071669 [list] [network] plant-type cell wall organization or biogenesis  (489 genes)  IEA  
GO:0016053 [list] [network] organic acid biosynthetic process  (622 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG
Protein NP_175933.1 
BLAST NP_175933.1 
Orthologous [Ortholog page] AT3G13510 (ath)  AT3G48230 (ath)  AT5G56530 (ath)  LOC4334507 (osa)  LOC4342683 (osa)  LOC4343684 (osa)  LOC7461352 (ppo)  LOC7483235 (ppo)  LOC11411399 (mtr)  LOC11418598 (mtr)  LOC18095018 (ppo)  LOC25501463 (mtr)  LOC100776799 (gma)  LOC100790139 (gma)  LOC100809342 (gma)  LOC100813504 (gma)  LOC101253614 (sly)  LOC101264758 (sly)  LOC103832590 (bra)  LOC103845089 (bra)  LOC103851819 (bra)  LOC103862918 (bra)  LOC103862919 (bra)  LOC103866128 (bra)  LOC103866776 (bra)  LOC103866779 (bra)  LOC103866780 (bra)  LOC103866782 (bra)  LOC103866790 (bra)  LOC103869478 (bra)  LOC103870125 (bra)  LOC123044463 (tae)  LOC123052323 (tae)  LOC123064519 (tae)  LOC123082598 (tae)  LOC123082600 (tae)  LOC123087554 (tae)  LOC123105533 (tae)  LOC123117825 (tae)  LOC123117827 (tae)  LOC123117888 (tae)  LOC123123350 (tae)  LOC123126221 (tae)  LOC123126222 (tae)  LOC123126295 (tae)  LOC123188085 (tae)  LOC123399598 (hvu)  LOC123425601 (hvu)  LOC123451054 (hvu)  LOC123452309 (hvu)  LOC123452871 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  extr 1,  cyto 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_175933.1)
Subcellular
localization
TargetP
scret 7,  mito 3  (predict for NP_175933.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT1G55360 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT3G13510 carboxyl-terminal peptidase, putative (DUF239) [detail] 820553
6.2 AT5G01090 Concanavalin A-like lectin family protein [detail] 831840
6.2 CSLC5 Cellulose-synthase-like C5 [detail] 829286
5.7 AT2G27060 Leucine-rich repeat protein kinase family protein [detail] 817248
5.6 AT3G14240 Subtilase family protein [detail] 820644
4.0 PP2C52 Protein phosphatase 2C family protein [detail] 827930
Coexpressed
gene list		 [Coexpressed gene list for AT1G55360]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257510_at
257510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257510_at
257510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257510_at
257510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841982      
Refseq ID (protein) NP_175933.1 


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