[][] ath   AT1G55490 Gene
functional annotation
Function   chaperonin 60 beta
GO BP
GO:0045041 [list] [network] protein import into mitochondrial intermembrane space  (9 genes)  IBA  
GO:0051085 [list] [network] chaperone cofactor-dependent protein refolding  (42 genes)  IDA  
GO:0042026 [list] [network] protein refolding  (45 genes)  IEA  
GO:0006458 [list] [network] 'de novo' protein folding  (51 genes)  IBA  
GO:0009627 [list] [network] systemic acquired resistance  (61 genes)  IMP  
GO:0008219 [list] [network] cell death  (127 genes)  IMP  
GO:0006457 [list] [network] protein folding  (166 genes)  TAS  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (33 genes)  IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM NAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0051082 [list] [network] unfolded protein binding  (125 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001320637.1  NP_001320638.1  NP_001320639.1  NP_175945.1  NP_849811.1 
BLAST NP_001320637.1  NP_001320638.1  NP_001320639.1  NP_175945.1  NP_849811.1 
Orthologous [Ortholog page] LOC542185 (zma)Cpn60beta2 (ath)Cpn60beta3 (ath)Cpn60beta4 (ath)LOC4327993 (osa)LOC4339910 (osa)LOC7461344 (ppo)LOC7483228 (ppo)LOC25482039 (mtr)LOC25482040 (mtr)LOC100251252 (vvi)LOC100261815 (vvi)LOC100263832 (vvi)LOC100280498 (zma)LOC100777674 (gma)LOC100785937 (gma)LOC100796464 (gma)LOC100819369 (gma)LOC101250405 (sly)LOC101253117 (sly)LOC101259035 (sly)LOC103629384 (zma)LOC103633537 (zma)LOC103829178 (bra)LOC103829780 (bra)LOC103832584 (bra)LOC103856922 (bra)LOC103859519 (bra)LOC107275738 (osa)LOC107279834 (osa)
Subcellular
localization
wolf
chlo 10  (predict for NP_001320637.1)
chlo 10  (predict for NP_001320638.1)
chlo 10  (predict for NP_001320639.1)
chlo 10  (predict for NP_175945.1)
chlo 10  (predict for NP_849811.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001320637.1)
chlo 9  (predict for NP_001320638.1)
chlo 9  (predict for NP_001320639.1)
chlo 9  (predict for NP_175945.1)
chlo 9  (predict for NP_849811.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
ath03040 Spliceosome 2
ath04144 Endocytosis 2
Genes directly connected with CPN60B on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
16.3 CPN60A chaperonin-60alpha [detail] 817344
13.9 AT5G55220 trigger factor type chaperone family protein [detail] 835615
13.0 emb2726 elongation factor Ts family protein [detail] 829027
11.6 cpHsc70-1 chloroplast heat shock protein 70-1 [detail] 828531
10.3 AT1G56050 GTP-binding protein-like protein [detail] 842056
9.8 FSD3 Fe superoxide dismutase 3 [detail] 832395
Coexpressed
gene list
[Coexpressed gene list for CPN60B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265076_at
265076_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265076_at
265076_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
265076_at
265076_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 841996    
Refseq ID (protein) NP_001320637.1 
NP_001320638.1 
NP_001320639.1 
NP_175945.1 
NP_849811.1 


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