[←][→] ath   At1g55530 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_001321432.1  NP_001321433.1  NP_564693.1 
BLAST NP_001321432.1  NP_001321433.1  NP_564693.1 
Orthologous [Ortholog page] AT3G13430 (ath)  AT4G26400 (ath)  ATCRT1 (ath)  LOC4339152 (osa)  LOC7461340 (ppo)  LOC7469869 (ppo)  LOC7483225 (ppo)  LOC7489682 (ppo)  LOC11433228 (mtr)  LOC100784876 (gma)  LOC101268503 (sly)  LOC103832581 (bra)  LOC103845076 (bra)  LOC103856934 (bra)  LOC103861624 (bra)  LOC103866098 (bra)  LOC103868391 (bra)  LOC103870136 (bra)  LOC123060432 (tae)  LOC123137404 (tae)  LOC123182406 (tae)  LOC123444355 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001321432.1)
nucl 10  (predict for NP_001321433.1)
nucl 10  (predict for NP_564693.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001321432.1)
other 6  (predict for NP_001321433.1)
other 6  (predict for NP_564693.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT1G55530 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.9 AT5G35320 DBH-like monooxygenase [detail] 833486
11.9 AT1G14200 RING/U-box superfamily protein [detail] 837980
9.1 MBF1C multiprotein bridging factor 1C [detail] 822041
8.5 AT1G26800 RING/U-box superfamily protein [detail] 839223
7.6 AT5G47830 uncharacterized protein [detail] 834834
6.3 AT5G46170 F-box family protein [detail] 834659
4.7 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein [detail] 839168
Coexpressed
gene list		 [Coexpressed gene list for AT1G55530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265077_at
265077_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265077_at
265077_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265077_at
265077_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842000      
Refseq ID (protein) NP_001321432.1 
NP_001321433.1 
NP_564693.1 


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