[←][→] ath   At1g55820 Gene
functional annotation
Function   lysine-specific demethylase, putative (DUF1296)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
KEGG
Protein NP_175978.2 
BLAST NP_175978.2 
Orthologous [Ortholog page] GIP1 (ath)  LOC103849753 (bra)  LOC103871018 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_175978.2)
Subcellular
localization
TargetP
other 9  (predict for NP_175978.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
Genes directly connected with AT1G55820 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 NAC082 NAC domain containing protein 82 [detail] 830792
6.6 AT1G24310 nuclear pore complex protein [detail] 839047
6.5 NUP1 nuclear pore complex protein [detail] 820234
5.5 DCP5-L decapping 5-like protein [detail] 834569
5.2 HEI10 RING/U-box superfamily protein [detail] 841784
5.1 AT2G47820 arginine-glutamic acid dipeptide repeat protein [detail] 819394
Coexpressed
gene list		 [Coexpressed gene list for AT1G55820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264560_at
264560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264560_at
264560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264560_at
264560_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842032      
Refseq ID (protein) NP_175978.2 


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