[←][→] ath   At1g55960 Gene
functional annotation
Function   Polyketide cyclase/dehydrase and lipid transport superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0097305 [list] [network] response to alcohol  (1209 genes)  IEA  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IEA  
GO:0006082 [list] [network] organic acid metabolic process  (1847 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO MF
GO:0008289 [list] [network] lipid binding  (240 genes)  IEA  
KEGG
Protein NP_001322903.1  NP_564705.1 
BLAST NP_001322903.1  NP_564705.1 
Orthologous [Ortholog page] AT3G13062 (ath)  LOC4329333 (osa)  LOC7465575 (ppo)  LOC11420462 (mtr)  LOC18104733 (ppo)  LOC101261699 (sly)  LOC102659764 (gma)  LOC102661161 (gma)  LOC103849738 (bra)  LOC103859496 (bra)  LOC103871005 (bra)  LOC123065444 (tae)  LOC123142984 (tae)  LOC123182840 (tae)  LOC123448097 (hvu) 
Subcellular
localization
wolf
chlo 2,  nucl 2,  extr 2,  vacu 1,  cyto_nucl 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_001322903.1)
chlo 2,  nucl 2,  extr 2,  vacu 1,  cyto_nucl 1,  chlo_mito 1  (predict for NP_564705.1)
Subcellular
localization
TargetP
chlo 2  (predict for NP_001322903.1)
chlo 2  (predict for NP_564705.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G55960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 ftsh9 FTSH protease 9 [detail] 836004
6.6 AT5G61670 orange protein [detail] 836289
6.0 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 818724
5.8 TPR4 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839500
Coexpressed
gene list		 [Coexpressed gene list for AT1G55960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260603_at
260603_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260603_at
260603_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260603_at
260603_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842047      
Refseq ID (protein) NP_001322903.1 
NP_564705.1 


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