[←][→] ath   At1g56060 Gene
functional annotation
Function   cysteine-rich/transmembrane domain protein B    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1901000 [list] [network] regulation of response to salt stress  (38 genes)  IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001319250.1  NP_176002.1 
BLAST NP_001319250.1  NP_176002.1 
Orthologous [Ortholog page] LOC103871001 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1,  chlo 1,  plas 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001319250.1)
chlo 7,  cyto 1,  mito 1,  plas 1,  extr 1,  mito_plas 1,  cyto_plas 1  (predict for NP_176002.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319250.1)
other 7  (predict for NP_176002.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT1G56060 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 CML37 calmodulin like 37 [detail] 834244
7.5 AT3G01830 Calcium-binding EF-hand family protein [detail] 820033
6.4 AT3G22910 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [detail] 821863
6.2 TET9 tetraspanin9 [detail] 829166
6.2 AT2G32190 cysteine-rich/transmembrane domain A-like protein [detail] 817778
6.0 AT2G32210 cysteine-rich/transmembrane domain A-like protein [detail] 817780
4.8 BCB blue-copper-binding protein [detail] 832145
4.7 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein [detail] 837894
Coexpressed
gene list		 [Coexpressed gene list for AT1G56060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262085_at
262085_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262085_at
262085_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262085_at
262085_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842057      
Refseq ID (protein) NP_001319250.1 
NP_176002.1 


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