[←][→] ath   AT1G56110 Gene
functional annotation
Function   NOP56-like pre RNA processing ribonucleoprotein  
GO BP
GO CC
GO:0031428 [list] [network] box C/D snoRNP complex  (16 genes)  IBA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030515 [list] [network] snoRNA binding  (19 genes)  IBA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_176007.1 
BLAST NP_176007.1 
Orthologous [Ortholog page] AT3G12860 (ath)  LOC4332851 (osa)  LOC4344186 (osa)  LOC7454542 (ppo)  LOC7454698 (ppo)  LOC11407456 (mtr)  LOC100267928 (vvi)  LOC100283975 (zma)  LOC100779446 (gma)  LOC100794470 (gma)  LOC100815506 (gma)  LOC101250547 (sly)  LOC103639131 (zma)  LOC103832537 (bra)  LOC103849056 (bra)  LOC103859472 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  plas 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_176007.1)
Subcellular
localization
TargetP
other 6  (predict for NP_176007.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with NOP56 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
21.2 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein [detail] 819668
17.7 NAP57 homologue of NAP57 [detail] 824882
17.1 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein [detail] 832770
12.9 ATG2 metallopeptidase M24 family protein [detail] 824343
12.9 OLI2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835690
12.5 NUC-L1 nucleolin like 1 [detail] 841314
11.8 HD2B histone deacetylase 2B [detail] 832328
11.8 FKBP53 FK506 BINDING PROTEIN 53 [detail] 828637
11.5 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein [detail] 820468
10.1 PUR5 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) [detail] 824667
9.8 STRS1 DEA(D/H)-box RNA helicase family protein [detail] 840087
Coexpressed
gene list		 [Coexpressed gene list for NOP56]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262094_at
262094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262094_at
262094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262094_at
262094_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842063      
Refseq ID (protein) NP_176007.1 


The preparation time of this page was 0.2 [sec].