[←][→] ath   At1g56110 Gene
functional annotation
Function   NOP56-like pre RNA processing ribonucleoprotein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_176007.1 
BLAST NP_176007.1 
Orthologous [Ortholog page] AT3G12860 (ath)  LOC4332851 (osa)  LOC4344186 (osa)  LOC7454542 (ppo)  LOC7454698 (ppo)  LOC11407456 (mtr)  LOC100779446 (gma)  LOC100794470 (gma)  LOC100815506 (gma)  LOC101250547 (sly)  LOC103832537 (bra)  LOC103849056 (bra)  LOC103854143 (bra)  LOC103859472 (bra)  LOC123043837 (tae)  LOC123043838 (tae)  LOC123051703 (tae)  LOC123051704 (tae)  LOC123066934 (tae)  LOC123144380 (tae)  LOC123182958 (tae)  LOC123187614 (tae)  LOC123187617 (tae)  LOC123424859 (hvu)  LOC123429534 (hvu)  LOC123449455 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  plas 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_176007.1)
Subcellular
localization
TargetP
other 6  (predict for NP_176007.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
Genes directly connected with NOP56 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
21.6 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein [detail] 819668
18.3 NAP57 homologue of NAP57 [detail] 824882
16.6 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein [detail] 832770
13.1 AT3G18600 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 821391
12.9 ATG2 metallopeptidase M24 family protein [detail] 824343
12.9 FIB2 fibrillarin 2 [detail] 828668
12.8 HD2B histone deacetylase 2B [detail] 832328
12.1 NUC-L1 nucleolin like 1 [detail] 841314
11.9 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein [detail] 820468
10.0 FKBP53 FK506 BINDING PROTEIN 53 [detail] 828637
9.8 STRS1 DEA(D/H)-box RNA helicase family protein [detail] 840087
9.7 PUR5 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) [detail] 824667
Coexpressed
gene list		 [Coexpressed gene list for NOP56]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262094_at
262094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262094_at
262094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262094_at
262094_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842063      
Refseq ID (protein) NP_176007.1 


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