[][] ath   At1g56180 Gene
functional annotation
Function   ATP-dependent zinc metalloprotease Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0006508 [list] [network] proteolysis  (413 genes)  IEA  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO CC
GO:0042651 [list] [network] thylakoid membrane  (350 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (16 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (34 genes)  IEA  
KEGG
Protein NP_001320440.1  NP_564711.1 
BLAST NP_001320440.1  NP_564711.1 
Orthologous [Ortholog page] LOC4328434 (osa)LOC7481597 (ppo)LOC11446781 (mtr)LOC100800880 (gma)LOC101254711 (sly)LOC103832531 (bra)LOC123132652 (tae)LOC123136744 (tae)LOC123144228 (tae)LOC123403387 (hvu)
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for NP_001320440.1)
chlo 9  (predict for NP_564711.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001320440.1)
chlo 8  (predict for NP_564711.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G56180 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 AT4G24630 DHHC-type zinc finger family protein [detail] 828565
6.1 TH1 thiamine biosynthesis protein [detail] 838901
5.9 ZTL Galactose oxidase/kelch repeat superfamily protein [detail] 835842
5.8 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 [detail] 831606
5.1 AT2G20830 folic acid binding / transferase [detail] 816615
4.5 TUA1 alpha-1 tubulin [detail] 842782
Coexpressed
gene list
[Coexpressed gene list for AT1G56180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262065_at
262065_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262065_at
262065_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262065_at
262065_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842071    
Refseq ID (protein) NP_001320440.1 
NP_564711.1 


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