[←][→] ath   At1g56190 Gene
functional annotation
Function   Phosphoglycerate kinase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0050691 [list] [network] regulation of defense response to virus by host  (8 genes)  IMP  
GO:0019375 [list] [network] galactolipid biosynthetic process  (13 genes)  IGI  
GO:0006096 [list] [network] glycolytic process  (28 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IGI  
GO CC
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0004672 [list] [network] protein kinase activity  (768 genes)  IDA  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001117503.1  NP_176015.1 
BLAST NP_001117503.1  NP_176015.1 
Orthologous [Ortholog page] LOC543279 (tae)  PGK1 (ath)  PGK (ath)  LOC4328435 (osa)  LOC4339204 (osa)  LOC4341792 (osa)  LOC7460679 (ppo)  LOC7481598 (ppo)  LOC7492954 (ppo)  LOC7496585 (ppo)  LOC9268592 (osa)  LOC11421966 (mtr)  LOC11424739 (mtr)  LOC11441786 (mtr)  LOC100795933 (gma)  LOC100796458 (gma)  LOC100801951 (gma)  LOC100802480 (gma)  LOC101253805 (sly)  LOC101254111 (sly)  LOC103830478 (bra)  LOC103832426 (bra)  LOC103849710 (bra)  LOC103853201 (bra)  LOC103859466 (bra)  LOC103870225 (bra)  LOC123132578 (tae)  LOC123144162 (tae)  LOC123154557 (tae)  LOC123160475 (tae)  LOC123166750 (tae)  LOC123182478 (tae)  LOC123406238 (hvu)  LOC123411329 (hvu)  LOC123443752 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 2  (predict for NP_001117503.1)
chlo 10  (predict for NP_176015.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001117503.1)
chlo 9  (predict for NP_176015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00710 Carbon fixation in photosynthetic organisms 6
ath00010 Glycolysis / Gluconeogenesis 5
ath01230 Biosynthesis of amino acids 5
ath00030 Pentose phosphate pathway 3
Genes directly connected with AT1G56190 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 PGK1 phosphoglycerate kinase 1 [detail] 820461
8.5 AT3G60750 Transketolase [detail] 825246
8.4 mtLPD1 mitochondrial lipoamide dehydrogenase 1 [detail] 841221
Coexpressed
gene list		 [Coexpressed gene list for AT1G56190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256228_at
256228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256228_at
256228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256228_at
256228_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842072      
Refseq ID (protein) NP_001117503.1 
NP_176015.1 


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