[←][→] ath   AT1G56190 Gene
functional annotation
Function   Phosphoglycerate kinase family protein  
GO BP
GO:0050691 [list] [network] regulation of defense response to virus by host  (8 genes)  IMP  
GO:0019375 [list] [network] galactolipid biosynthetic process  (13 genes)  IGI  
GO:0019253 [list] [network] reductive pentose-phosphate cycle  (18 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IGI  
GO:0006096 [list] [network] glycolytic process  (62 genes)  IMP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0004672 [list] [network] protein kinase activity  (1017 genes)  IDA  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (116 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001117503.1  NP_176015.1 
BLAST NP_001117503.1  NP_176015.1 
Orthologous [Ortholog page] PGK1 (ath)  PGK (ath)  LOC4328435 (osa)  LOC4339204 (osa)  LOC4341792 (osa)  LOC7460679 (ppo)  LOC7481598 (ppo)  LOC7492954 (ppo)  LOC7496585 (ppo)  LOC9268592 (osa)  LOC11421966 (mtr)  LOC11424739 (mtr)  LOC11441786 (mtr)  LOC100244419 (vvi)  LOC100249576 (vvi)  LOC100274579 (zma)  LOC100281237 (zma)  LOC100795933 (gma)  LOC100796458 (gma)  LOC100801951 (gma)  LOC100802480 (gma)  LOC101253805 (sly)  LOC101254111 (sly)  LOC103635817 (zma)  LOC103830478 (bra)  LOC103832426 (bra)  LOC103849710 (bra)  LOC103853201 (bra)  LOC103859466 (bra)  LOC103870225 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 2  (predict for NP_001117503.1)
chlo 10  (predict for NP_176015.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001117503.1)
chlo 9  (predict for NP_176015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath01230 Biosynthesis of amino acids 7
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 5
ath00010 Glycolysis / Gluconeogenesis 4
Genes directly connected with AT1G56190 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 PGK1 phosphoglycerate kinase 1 [detail] 820461
8.1 TIM triosephosphate isomerase [detail] 816652
7.9 GS2 glutamine synthetase 2 [detail] 833535
7.8 AT3G60750 Transketolase [detail] 825246
5.8 DJ1B Class I glutamine amidotransferase-like superfamily protein [detail] 841762
Coexpressed
gene list		 [Coexpressed gene list for AT1G56190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256228_at
256228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256228_at
256228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256228_at
256228_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842072      
Refseq ID (protein) NP_001117503.1 
NP_176015.1 


The preparation time of this page was 0.3 [sec].